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种间电子传递在厌氧微生物群落中的建模。

Modeling of interspecies electron transfer in anaerobic microbial communities.

机构信息

INRAE, Univ Montpellier, LBE, 102 avenue des Etangs, 11100, Narbonne, France.

SUEZ, Centre International de Recherche Sur l'Eau et l'Environnement (CIRSEE), Le Pecq, France.

出版信息

Curr Opin Biotechnol. 2021 Feb;67:49-57. doi: 10.1016/j.copbio.2020.12.019. Epub 2021 Jan 16.

Abstract

Interspecies electron transfer (IET) is a key phenomenon in anaerobic ecosystems, which is traditionally modeled as hydrogen transfer. Recently discovered alternative mediated IET (MIET) or direct IET (DIET) offer exciting alternative mechanisms of microbial partnerships that could lead to new strategies for the improvement of biotechnologies. Here, we analyze mathematical modeling of DIET and MIET in anaerobic ecosystems. Bioenergetics approaches already enable the evaluation of different energy sharing scenarios between microorganisms and give interesting clues on redox mediators and on possible ways of driving microbial communities relying on IET. The modeling of DIET kinetics however is currently only in its infancy. Recent concepts introduced for the modeling of electroactive biofilms should be further exploited. Recent modeling examples confirms the potential of DIET to increase the IET rates compared to H-MIET, but also point out the need for additional characterizations of biological components supporting IET to improve predictions.

摘要

种间电子转移(IET)是厌氧生态系统中的一个关键现象,传统上被建模为氢转移。最近发现的替代介导的 IET(MIET)或直接 IET(DIET)提供了微生物伙伴关系的令人兴奋的替代机制,这可能为生物技术的改进带来新的策略。在这里,我们分析了厌氧生态系统中 DIET 和 MIET 的数学建模。生物能量学方法已经能够评估微生物之间不同的能量共享场景,并为氧化还原介质以及可能依赖 IET 驱动微生物群落的方式提供有趣的线索。然而,DIET 动力学的建模目前还处于起步阶段。最近为电活性生物膜建模引入的概念应该得到进一步的开发。最近的建模示例证实了 DIET 相对于 H-MIET 提高 IET 速率的潜力,但也指出需要对支持 IET 的生物成分进行额外的表征,以提高预测能力。

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