• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

九刺鱼(鲈形目,刺鱼科)的完整线粒体基因组

Complete mitochondrial genome of the nine-spined stickleback (Gasterosteiformes, Gasterosteidae).

作者信息

Guo Baocheng, Toli Elisavet-Aspasia, Merilä Juha

机构信息

Department of Biosciences, Ecological Genetics Research Unit, University of Helsinki, Helsinki, Finland.

Department of Biological Application & Technology, University of Ioannina, Greece.

出版信息

Mitochondrial DNA B Resour. 2016 Feb 1;1(1):72-73. doi: 10.1080/23802359.2015.1137829.

DOI:10.1080/23802359.2015.1137829
PMID:33473413
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800178/
Abstract

The complete mitochondrial genome of the nine-spined stickleback was obtained with Illumina sequencing of genomic DNA. The assembled mitogenome sequence was 16 582 bp long, and the gene number, order and contents were identical to those of other sequenced mitogenomes. The complete mitogenome of from its European range can provide an important template for further phylogenetic and population genetic studies of the species complex.

摘要

通过对基因组DNA进行Illumina测序,获得了九刺鱼的完整线粒体基因组。组装后的线粒体基因组序列长度为16582 bp,其基因数量、顺序和内容与其他已测序的线粒体基因组相同。来自其欧洲分布范围的完整线粒体基因组可为该物种复合体的进一步系统发育和群体遗传学研究提供重要模板。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/10e0/7800178/30e3d0dc998c/TMDN_A_1137829_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/10e0/7800178/30e3d0dc998c/TMDN_A_1137829_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/10e0/7800178/30e3d0dc998c/TMDN_A_1137829_F0001_B.jpg

相似文献

1
Complete mitochondrial genome of the nine-spined stickleback (Gasterosteiformes, Gasterosteidae).九刺鱼(鲈形目,刺鱼科)的完整线粒体基因组
Mitochondrial DNA B Resour. 2016 Feb 1;1(1):72-73. doi: 10.1080/23802359.2015.1137829.
2
Complete mitochondrial genome of the Ukrainian nine-spined stickleback (Gasterosteiformes, Gasterosteidae).乌克兰九刺鱼(鲈形目,刺鱼科)的完整线粒体基因组
Mitochondrial DNA B Resour. 2016 Feb 1;1(1):68-69. doi: 10.1080/23802359.2015.1137827.
3
Complete mitochondrial genomes of the smooth tail nine-spined sticklebacks (Gasterosteiformes, Gasterosteidae).光滑尾九刺鱼(鲈形目,刺鱼科)的完整线粒体基因组
Mitochondrial DNA B Resour. 2016 Feb 1;1(1):70-71. doi: 10.1080/23802359.2015.1137828.
4
Complete mitochondrial genome of the Sakhalin nine-spined stickleback (Gasterosteiformes, Gasterosteidae).
Mitochondrial DNA B Resour. 2016 Feb 1;1(1):74-75. doi: 10.1080/23802359.2015.1137830.
5
Complete mitochondrial genome of the Greek nine-spined stickleback (Gasterosteiformes, Gasterosteidae).希腊九刺鱼(鲈形目,刺鱼科)的完整线粒体基因组
Mitochondrial DNA B Resour. 2016 Feb 1;1(1):66-67. doi: 10.1080/23802359.2015.1137826.
6
The genome sequence of the nine-spined stickleback, (Linnaeus, 1758).九刺鱼(林奈,1758年)的基因组序列。
Wellcome Open Res. 2023 Dec 5;8:555. doi: 10.12688/wellcomeopenres.20354.1. eCollection 2023.
7
A High-Quality Assembly of the Nine-Spined Stickleback (Pungitius pungitius) Genome.高质量组装九刺鱼(Pungitius pungitius)基因组。
Genome Biol Evol. 2019 Nov 1;11(11):3291-3308. doi: 10.1093/gbe/evz240.
8
Complete mitochondrial genome of the Amur stickleback Pungitius kaibarae (Gasterosteiformes, Gasterosteidae).阿穆尔刺鱼(Pungitius kaibarae)(鲉形目,刺鱼科)的完整线粒体基因组
Mitochondrial DNA. 2012 Aug;23(4):313-4. doi: 10.3109/19401736.2012.683183. Epub 2012 Jun 18.
9
Complete mitochondrial genome of the Amur stickleback Pungitius sinensis (Gasterosteiformes, Gasterosteidae).中华多刺鱼(鲈形目,刺鱼科)的线粒体全基因组
Mitochondrial DNA. 2012 Aug;23(4):293-4. doi: 10.3109/19401736.2012.674125. Epub 2012 May 1.
10
Utility of sequenced genomes for microsatellite marker development in non-model organisms: a case study of functionally important genes in nine-spined sticklebacks (Pungitius pungitius).测序基因组在非模式生物中小卫星标记开发中的应用:以九刺鱼(Pungitius pungitius)9 个功能重要基因为例。
BMC Genomics. 2010 May 27;11:334. doi: 10.1186/1471-2164-11-334.

引用本文的文献

1
De Novo Mutation Rates in Sticklebacks.新突变率在棘鱼中。
Mol Biol Evol. 2023 Sep 1;40(9). doi: 10.1093/molbev/msad192.
2
A High-Quality Assembly of the Nine-Spined Stickleback (Pungitius pungitius) Genome.高质量组装九刺鱼(Pungitius pungitius)基因组。
Genome Biol Evol. 2019 Nov 1;11(11):3291-3308. doi: 10.1093/gbe/evz240.

本文引用的文献

1
Population genetic structure and colonization history of short ninespine sticklebacks (Pungitius kaibarae).短鳍九刺鱼(Pungitius kaibarae)的种群遗传结构和殖民历史。
Ecol Evol. 2015 Aug;5(15):3075-89. doi: 10.1002/ece3.1594. Epub 2015 Jul 7.
2
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.RAxML 版本 8:用于系统发育分析和大型系统发育后分析的工具。
Bioinformatics. 2014 May 1;30(9):1312-3. doi: 10.1093/bioinformatics/btu033. Epub 2014 Jan 21.
3
Nine-spined stickleback (Pungitius pungitius): an emerging model for evolutionary biology research.
九刺鱼(Pungitius pungitius):进化生物学研究的新兴模式生物。
Ann N Y Acad Sci. 2013 Jun;1289:18-35. doi: 10.1111/nyas.12089. Epub 2013 Mar 29.
4
Complete mitochondrial genome of the Amur stickleback Pungitius kaibarae (Gasterosteiformes, Gasterosteidae).阿穆尔刺鱼(Pungitius kaibarae)(鲉形目,刺鱼科)的完整线粒体基因组
Mitochondrial DNA. 2012 Aug;23(4):313-4. doi: 10.3109/19401736.2012.683183. Epub 2012 Jun 18.
5
Complete mitochondrial genome of the Amur stickleback Pungitius sinensis (Gasterosteiformes, Gasterosteidae).中华多刺鱼(鲈形目,刺鱼科)的线粒体全基因组
Mitochondrial DNA. 2012 Aug;23(4):293-4. doi: 10.3109/19401736.2012.674125. Epub 2012 May 1.
6
Phylogeography of ninespine sticklebacks (Pungitius pungitius) in North America: glacial refugia and the origins of adaptive traits.北美的九刺鱼(Pungitius pungitius)的系统地理学:冰川避难所和适应特征的起源。
Mol Ecol. 2010 Sep;19(18):4061-76. doi: 10.1111/j.1365-294X.2010.04801.x. Epub 2010 Aug 31.
7
History vs. habitat type: explaining the genetic structure of European nine-spined stickleback (Pungitius pungitius) populations.历史与栖息地类型:解释欧洲九刺鱼(Pungitius pungitius)种群的遗传结构。
Mol Ecol. 2010 Mar;19(6):1147-61. doi: 10.1111/j.1365-294X.2010.04553.x. Epub 2010 Feb 15.
8
The Sequence Alignment/Map format and SAMtools.序列比对/映射格式和 SAMtools。
Bioinformatics. 2009 Aug 15;25(16):2078-9. doi: 10.1093/bioinformatics/btp352. Epub 2009 Jun 8.
9
Fast and accurate short read alignment with Burrows-Wheeler transform.使用Burrows-Wheeler变换进行快速准确的短读比对。
Bioinformatics. 2009 Jul 15;25(14):1754-60. doi: 10.1093/bioinformatics/btp324. Epub 2009 May 18.
10
Stickleback phylogenies resolved: evidence from mitochondrial genomes and 11 nuclear genes.棘背鱼系统发育关系解析:来自线粒体基因组和11个核基因的证据
Mol Phylogenet Evol. 2009 Feb;50(2):401-4. doi: 10.1016/j.ympev.2008.10.014. Epub 2008 Nov 5.