Pastenes Luis, Valdivieso Camilo, Del Pozo Talía, Méndez Marco A
Laboratorio de Genética y Evolución, Departamento de Ciencias Ecológicas, Facultad de Ciencias, Universidad de Chile, Santiago, Chile.
Laboratorio de Bioinformática y Expresión Génica, INTA, Universidad de Chile, Santiago, Chile.
Mitochondrial DNA B Resour. 2016 Mar 28;1(1):136-137. doi: 10.1080/23802359.2016.1144097.
is an endemic frog of northern Chile that is only known at its type locality, Chusmisa. In this study, the complete mitochondrial genome of was assembled using high-throughput sequencing data, yielding a circular genome of 19 312 bp with a nucleotide composition of A = 30.8%, C = 24.4%, G = 13.6% and T = 31.2%. Its gene composition and structure were similar to other anuran genomes available: 13 protein-coding genes, two rRNA genes, 22 tRNA genes and the D-loop region. Phylogenetic analysis using Bayesian inference (BI) and maximum likelihood (ML) showed that , and are a highly supported monophyletic group. This genome information will allow us to gain a better understanding into phylogenetic and phylogeographic relationships in the genus .
是智利北部的一种特有蛙类,仅在其模式产地丘斯米萨被发现。在本研究中,利用高通量测序数据组装了该蛙的完整线粒体基因组,得到一个19312 bp的环状基因组,核苷酸组成为A = 30.8%、C = 24.4%、G = 13.6%和T = 31.2%。其基因组成和结构与其他已有的无尾目基因组相似:13个蛋白质编码基因、2个rRNA基因、22个tRNA基因和D环区域。使用贝叶斯推断(BI)和最大似然法(ML)进行的系统发育分析表明,[具体物种名1]、[具体物种名2]和[具体物种名3]是一个得到高度支持的单系类群。这些基因组信息将使我们能够更好地了解该属的系统发育和系统地理学关系。