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斑翅果蝇的完整线粒体基因组(双翅目:果蝇科)

Complete mitochondrial genome of the spotted-wing drosophila, (Diptera: Drosophilidae).

作者信息

Kim Jong Seok, Kim Min Jee, Choi Deuk-Soo, Kim Iksoo

机构信息

College of Agriculture & Life Sciences, Chonnam National University, Gwangju, Republic of Korea.

Department of Plant Quarantine, Animal and Plant Quarantine Agency, Anyang, Republic of Korea.

出版信息

Mitochondrial DNA B Resour. 2016 Mar 28;1(1):222-223. doi: 10.1080/23802359.2016.1155422.

DOI:10.1080/23802359.2016.1155422
PMID:33473458
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800019/
Abstract

The spotted-wing drosophila, (Diptera: Drosophilidae) is an Asian species introduced into North America and Europe. It damages a wide variety of thin-skinned fruits. We sequenced the complete mitochondrial genome (mitogenome) to better understand the mitogenomic characteristics of this species. The 16 230-bp complete mitogenome of the species consists of a typical set of genes, including 13 protein-coding genes (PCGs), two rRNA genes and 22 tRNA genes, and one major non-coding A + T-rich region, with an arrangement typical of insects. Twelve PCGs began with the typical ATN codon, whereas the COI began with TCG, which has been designated as the start codon for other species. The 1525-bp A + T-rich region is the second longest in species for which the whole mitogenome has been sequenced, after . Phylogenetic analysis using the 13 PCGs of the species indicated that is placed, with a strong support, in the basal lineage of the previously defined Melanogaster group.

摘要

斑翅果蝇(双翅目:果蝇科)是一种从亚洲传入北美和欧洲的物种。它会损害多种薄皮水果。我们对其完整线粒体基因组(线粒体基因组)进行了测序,以更好地了解该物种的线粒体基因组特征。该物种16230碱基对的完整线粒体基因组由一组典型的基因组成,包括13个蛋白质编码基因(PCG)、两个rRNA基因和22个tRNA基因,以及一个主要的非编码富含A+T区域,其排列方式为昆虫典型的排列方式。12个PCG以典型的ATN密码子起始,而COI以TCG起始,TCG已被指定为其他物种的起始密码子。1525碱基对的富含A+T区域是已对其完整线粒体基因组进行测序的物种中第二长的,仅次于[此处原文缺失相关物种名称]。使用该物种的13个PCG进行的系统发育分析表明,在有力支持下,该物种位于先前定义的黑腹果蝇组的基部谱系中。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f6d1/7800019/803833e841ce/TMDN_A_1155422_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f6d1/7800019/803833e841ce/TMDN_A_1155422_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f6d1/7800019/803833e841ce/TMDN_A_1155422_F0001_C.jpg

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Characterization of the complete mitochondrial genome of flower-breeding Drosophila incompta (Diptera, Drosophilidae).花卉育种果蝇(双翅目,果蝇科)线粒体全基因组的特征分析
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