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(鳞翅目:草螟科)的完整线粒体基因组。

The complete mitochondrial genome of (Lepidoptera: Crambidae).

作者信息

Chen Shan, Li Fen-Hong, Lan Xu-E, You Ping

机构信息

College of Life Science, Shaanxi Normal University, Xi'an, China.

出版信息

Mitochondrial DNA B Resour. 2016 Sep 4;1(1):638-639. doi: 10.1080/23802359.2016.1214551.

DOI:10.1080/23802359.2016.1214551
PMID:33473580
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800577/
Abstract

The complete mitochondrial genome of (Walker, 1859) has been determined. The entire sequence is 15,219 bp in length which contains 13 protein-coding genes (PCGs), 22 transfer RNA genes, two ribosomal RNA genes, and an A + T-rich region. All PCGs start with the typical ATN codon except for with CGA. TAA is used for all the PCGs, while the and possess incomplete termination codons T or TA. The secondary structure of 22 tRNAs have the typical clover-leaf pattern except for lacking the dihydrouridine (DHU) stem. The A + T-rich region, located between the and , do not contain the motif "ATAGA" that is conserved across other lepidopteran species mitogenomes. A phylogenetic relationship of Pyraloidea has been reconstructed based on 13 PCGs data using Bayesian inference (BI) method.

摘要

已确定(沃克,1859年)的完整线粒体基因组。整个序列长度为15219 bp,包含13个蛋白质编码基因(PCGs)、22个转运RNA基因、两个核糖体RNA基因和一个富含A+T的区域。除了以CGA起始的基因外,所有PCGs均以典型的ATN密码子起始。所有PCGs均使用TAA作为终止密码子,而某些基因具有不完整的终止密码子T或TA。22个tRNA的二级结构具有典型的三叶草结构,除了缺少二氢尿嘧啶(DHU)茎的基因。富含A+T的区域位于两个基因之间,不包含在其他鳞翅目物种线粒体基因组中保守的“ATAGA”基序。基于13个PCGs数据,使用贝叶斯推断(BI)方法重建了螟蛾总科的系统发育关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/824e/7800577/64abd97eecb5/TMDN_A_1214551_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/824e/7800577/64abd97eecb5/TMDN_A_1214551_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/824e/7800577/64abd97eecb5/TMDN_A_1214551_F0001_B.jpg

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