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(鳞翅目:草螟科)属的完整线粒体基因组结构及其系统发育意义

Complete Mitogenomic Structure and Phylogenetic Implications of the Genus (Lepidoptera: Crambidae).

作者信息

Zhou Nan, Dong Yanling, Qiao Pingping, Yang Zhaofu

机构信息

Key Laboratory of Plant Protection Resources and Pest Management, Ministry of Education, Northwest A&F University, Yangling 712100, China.

Entomological Museum, College of Plant Protection, Northwest A&F University, Yangling 712100, China.

出版信息

Insects. 2020 Apr 7;11(4):232. doi: 10.3390/insects11040232.

Abstract

To understand mitogenome characteristics and reveal phylogenetic relationships of the genus including several notorious pests of great importance for crops, we sequenced the complete mitogenomes of four species: (Guenée, 1854), (Hübner, 1796), (Walker, 1859) and (Guenée, 1854). Results indicate that the four mitogenomes-, , and -are 15,245, 15,248, 15,311, and 15,208 bp in size, respectively. All four mitogenomes are comprised of 37 encoded genes and a control region. All 13 protein-coding genes (PCGs) initiate with ATN and terminate with TAN, with the exception of that starts with CGA, and , , and that terminate with an incomplete codon T. All transfer RNA genes (tRNAs) present the typical clover-leaf secondary structure except for the (AGN) gene. There are some conserved structural elements in the control region. Our analyses indicate that and exhibit higher evolution rates compared to other PCGs. Phylogenetic analyses based on mitogenomes using both maximum likelihood (ML) and Bayesian inference (BI) methods revealed the relationship ( + ( + ( + ( + ( + ))))) within .

摘要

为了解包括几种对农作物极为重要的臭名昭著害虫在内的该属线粒体基因组特征并揭示其系统发育关系,我们对四种物种的完整线粒体基因组进行了测序:(瓜内,1854年)、(胡伯纳,1796年)、(沃克,1859年)和(瓜内,1854年)。结果表明,这四个线粒体基因组——、、和——的大小分别为15,245、15,248、15,311和15,208碱基对。所有四个线粒体基因组均由37个编码基因和一个控制区组成。所有13个蛋白质编码基因(PCGs)均以ATN起始并以TAN终止,但起始于CGA,以及、和以不完整密码子T终止除外。除(AGN)基因外,所有转运RNA基因(tRNAs)均呈现典型的三叶草叶二级结构。控制区存在一些保守的结构元件。我们的分析表明,与其他PCGs相比,和表现出更高的进化速率。使用最大似然法(ML)和贝叶斯推断法(BI)基于线粒体基因组进行的系统发育分析揭示了内的关系( + ( + ( + ( + ( + ( + ))))))。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a945/7240680/437c3fd44469/insects-11-00232-g001.jpg

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