• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

暗足林鼠()(啮齿目,仓鼠科)的完整线粒体基因组。

The complete mitochondrial genome of the dusky-footed woodrat() (Rodentia, Cricetidae).

作者信息

Brown Sarah K, Blois Jessica L

机构信息

Life and Environmental Sciences, School of Natural Sciences, University of California, Merced, CA, USA.

出版信息

Mitochondrial DNA B Resour. 2016 Oct 3;1(1):728-729. doi: 10.1080/23802359.2016.1233464.

DOI:10.1080/23802359.2016.1233464
PMID:33473606
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800413/
Abstract

The dusky-footed woodrat () is an endemic North American rodent belonging to the family Cricetidae. We present here the first complete mitogenome within the genus. The mitogenome is 16,199 bp in length, and has a structure and gene organization similar to other rodent species (e.g. , ). The overall base composition is A (35.2%), C (25.5%), G (12.3%), T (27.0%), with a GC content of 37.8%, similar to other rodents. This mitogenome serves as a foundation for future phylogenetic, phylogeographic and population genetic studies.

摘要

暗足林鼠()是北美特有的啮齿动物,属于仓鼠科。我们在此展示该属内的首个完整线粒体基因组。该线粒体基因组长度为16,199 bp,其结构和基因组织与其他啮齿动物物种(如,)相似。总体碱基组成为A(35.2%)、C(25.5%)、G(12.3%)、T(27.0%),GC含量为37.8%,与其他啮齿动物相似。这个线粒体基因组为未来的系统发育、系统地理学和群体遗传学研究奠定了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16e0/7800413/a2d82b3b09b4/TMDN_A_1233464_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16e0/7800413/a2d82b3b09b4/TMDN_A_1233464_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16e0/7800413/a2d82b3b09b4/TMDN_A_1233464_F0001_B.jpg

相似文献

1
The complete mitochondrial genome of the dusky-footed woodrat() (Rodentia, Cricetidae).暗足林鼠()(啮齿目,仓鼠科)的完整线粒体基因组。
Mitochondrial DNA B Resour. 2016 Oct 3;1(1):728-729. doi: 10.1080/23802359.2016.1233464.
2
Vector competence of Ixodes pacificus and I. spinipalpis (Acari: Ixodidae), and reservoir competence of the dusky-footed woodrat (Neotoma fuscipes) and the deer mouse (Peromyscus maniculatus), for Borrelia bissettii.太平洋硬蜱和棘刺硬蜱(蜱螨亚纲:硬蜱科)对伯氏疏螺旋体的媒介能力,以及暗足林鼠(加州林鼠)和鹿鼠(白足鼠)对伯氏疏螺旋体的储存宿主能力。
J Med Entomol. 2003 May;40(3):311-20. doi: 10.1603/0022-2585-40.3.311.
3
Phylogeographical structure and regional history of the dusky-footed woodrat, Neotoma fuscipes.暗足林鼠(Neotoma fuscipes)的系统地理学结构与区域历史
Mol Ecol. 2002 Feb;11(2):229-42. doi: 10.1046/j.0962-1083.2001.01430.x.
4
Description and epidemiology of Theileria youngi n. sp. from a northern Californian dusky-footed woodrat (Neotoma Fuscipes) population.来自北加利福尼亚州暗足林鼠(Neotoma Fuscipes)种群的尤氏泰勒虫新种的描述与流行病学
J Parasitol. 2001 Apr;87(2):373-8. doi: 10.1645/0022-3395(2001)087[0373:DAEOTY]2.0.CO;2.
5
Detection and characterization of Borrelia bissettii in rodents from the central California coast.加利福尼亚中部海岸啮齿动物中比氏疏螺旋体的检测与鉴定
J Med Entomol. 2004 Jul;41(4):736-45. doi: 10.1603/0022-2585-41.4.736.
6
The complete mitochondrial genome of Microtus fortis calamorum (Arvicolinae, Rodentia) and its phylogenetic analysis.黑线仓鼠指名亚种(仓鼠科,啮齿目)的完整线粒体基因组及其系统发育分析。
Gene. 2012 May 1;498(2):288-95. doi: 10.1016/j.gene.2012.02.022. Epub 2012 Feb 24.
7
A New Species of Eimeria (Apicomplexa: Eimeriidae) from Eastern Woodrat, Neotoma floridana (Rodentia: Cricetidae), from Arkansas, USA, and a Summation of Eimerians from North American Woodrats.一种来自美国阿肯色州的东部林鼠(Neotoma floridana,Rodentia:Cricetidae)的艾美耳球虫(Apicomplexa:Eimeriidae)新种,以及北美的林鼠艾美耳球虫综述。
Acta Parasitol. 2020 Jun;65(2):335-340. doi: 10.2478/s11686-020-00167-5. Epub 2020 Jan 20.
8
[Comparison of specific genomic DNA fragment between Microtus fortis calamorum and Microtus fortis fortis].[长江亚种东方田鼠与指名亚种东方田鼠特定基因组DNA片段的比较]
Yi Chuan Xue Bao. 2003 Jun;30(6):540-6.
9
Dusky-footed wood rats (Neotoma fuscipes) as reservoirs of granulocytic Ehrlichiae (Rickettsiales: Ehrlichieae) in northern California.作为加利福尼亚州北部粒细胞埃立克体(立克次氏体目:埃立克体科)宿主的暗足林鼠(Neotoma fuscipes)
J Clin Microbiol. 1999 Oct;37(10):3323-7. doi: 10.1128/JCM.37.10.3323-3327.1999.
10
The dusky-footed woodrat (Neotoma fuscipes) is susceptible to infection by Anaplasma phagocytophilum originating from woodrats, horses, and dogs.暗足林鼠(Neotoma fuscipes)易受源自林鼠、马和狗的嗜吞噬细胞无形体感染。
J Wildl Dis. 2010 Jul;46(3):810-7. doi: 10.7589/0090-3558-46.3.810.

引用本文的文献

1
Mitochondrial DNA Diversity of Mesocricetus auratus and Other Cricetinae Species among Cricetidae Family.仓鼠科中金黄仓鼠和其他沙鼠的线粒体 DNA 多样性。
Biochem Genet. 2022 Dec;60(6):1881-1894. doi: 10.1007/s10528-022-10195-7. Epub 2022 Feb 5.
2
Mitochondrial genome of an Allegheny Woodrat ().一只阿勒格尼林鼠的线粒体基因组()。 (备注:原文括号内内容缺失,翻译只能到此程度)
Mitochondrial DNA B Resour. 2018 Feb 22;3(1):256-258. doi: 10.1080/23802359.2018.1437806.

本文引用的文献

1
W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis.W-IQ-TREE:一种用于最大似然分析的快速在线系统发育工具。
Nucleic Acids Res. 2016 Jul 8;44(W1):W232-5. doi: 10.1093/nar/gkw256. Epub 2016 Apr 15.
2
In-solution hybridization for mammalian mitogenome enrichment: pros, cons and challenges associated with multiplexing degraded DNA.用于富集哺乳动物线粒体基因组的溶液内杂交:与多重降解DNA相关的优点、缺点和挑战
Mol Ecol Resour. 2016 Sep;16(5):1173-88. doi: 10.1111/1755-0998.12448. Epub 2015 Aug 24.
3
MITOS: improved de novo metazoan mitochondrial genome annotation.
MITOS:改进的从头后生动物线粒体基因组注释。
Mol Phylogenet Evol. 2013 Nov;69(2):313-9. doi: 10.1016/j.ympev.2012.08.023. Epub 2012 Sep 7.
4
The Sequence Alignment/Map format and SAMtools.序列比对/映射格式和 SAMtools。
Bioinformatics. 2009 Aug 15;25(16):2078-9. doi: 10.1093/bioinformatics/btp352. Epub 2009 Jun 8.
5
Fast and accurate short read alignment with Burrows-Wheeler transform.使用Burrows-Wheeler变换进行快速准确的短读比对。
Bioinformatics. 2009 Jul 15;25(14):1754-60. doi: 10.1093/bioinformatics/btp324. Epub 2009 May 18.
6
Packrat Middens. The Last 40,000 Years of Biotic Change. Julio L. Betancourt, Thomas R. Van Devender, and Paul S. Martin, Eds. University of Arizona Press, Tucson, 1990. viii, 469 pp., illus. $55.《囊鼠 midden 研究:过去 4 万年的生物变化》。胡利奥·L·贝当古、托马斯·R·范德文德、保罗·S·马丁 编。亚利桑那大学出版社,图森,1990 年。共八页,469 页,有插图。售价 55 美元。
Science. 1990 Nov 16;250(4983):1021-2. doi: 10.1126/science.250.4983.1021-a.
7
The complete nucleotide sequence of Chinese hamster (Cricetulus griseus) mitochondrial DNA.中国仓鼠(黑线仓鼠)线粒体DNA的完整核苷酸序列。
DNA Seq. 2007 Oct;18(5):341-6. doi: 10.1080/10425170601101287.
8
Neotomine-peromyscine rodent systematics based on combined analyses of nuclear and mitochondrial DNA sequences.基于核DNA和线粒体DNA序列联合分析的林鼠-鹿鼠啮齿动物系统学
Mol Phylogenet Evol. 2006 Jul;40(1):251-8. doi: 10.1016/j.ympev.2006.03.016. Epub 2006 Apr 19.
9
Automatic annotation of organellar genomes with DOGMA.使用DOGMA对细胞器基因组进行自动注释。
Bioinformatics. 2004 Nov 22;20(17):3252-5. doi: 10.1093/bioinformatics/bth352. Epub 2004 Jun 4.
10
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.tRNAscan-SE:用于改进基因组序列中转运RNA基因检测的程序。
Nucleic Acids Res. 1997 Mar 1;25(5):955-64. doi: 10.1093/nar/25.5.955.