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西藏温泉蛇(沃尔,1907年)(爬行纲,游蛇科)的完整线粒体基因组

The complete mitochondrial genome of the Xizang hot-spring snake, Wall, 1907 (Reptilia, colubridae).

作者信息

Weng Shi-Yang, Peng Li-Fang, He Miao, Duan Shuang-Quan, Huang Song

机构信息

School of Sciences, Tibet University, Lahsa, China.

College of Life and Environment Sciences, Huangshan University, Huangshan, China.

出版信息

Mitochondrial DNA B Resour. 2016 Dec 9;1(1):921-922. doi: 10.1080/23802359.2016.1225522.

DOI:10.1080/23802359.2016.1225522
PMID:33473679
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800217/
Abstract

The Xizang hot-spring snake, (Reptilia, Colubridae), is a relict species of the family Colubridae, which is known only from Tibet, China. In this study, we report the complete mitochondrial genome of this species. The total length of the genome is 17,385 bp, and comprises 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and 2 control regions. The total base composition is 32.5% for A, 23.8% for T, 13.5% for G, and 30.2% for C. The phylogenetic tree with 13 protein-coding genes (PCGs) of . together with 12 other closely related species belonging to the family Colubridae was built, in order to prove the validity of the mitogenome of . .

摘要

西藏温泉蛇(爬行纲,游蛇科)是游蛇科的一个孑遗物种,仅分布于中国西藏。在本研究中,我们报道了该物种的完整线粒体基因组。基因组全长17385 bp,包括13个蛋白质编码基因、22个tRNA基因、2个rRNA基因和2个控制区。碱基总组成中,A占32.5%,T占23.8%,G占13.5%,C占30.2%。构建了包含西藏温泉蛇13个蛋白质编码基因以及游蛇科其他12个近缘物种的系统发育树,以验证西藏温泉蛇线粒体基因组的有效性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b621/7800217/2abd896f4965/TMDN_A_1225522_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b621/7800217/2abd896f4965/TMDN_A_1225522_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b621/7800217/2abd896f4965/TMDN_A_1225522_F0001_B.jpg

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本文引用的文献

1
Complete mitochondrial genome of the Xianggelila Hot-spring snake, (Reptilia, Colubridae).香格里拉温泉蛇(爬行纲,游蛇科)的完整线粒体基因组
Mitochondrial DNA B Resour. 2016 Jul 23;1(1):536-537. doi: 10.1080/23802359.2016.1197072.
2
Population genetic structure and geographic differentiation in the hot spring snake Thermophis baileyi (Serpentes, Colubridae): indications for glacial refuges in southern-central Tibet.温泉蛇 Thermophis baileyi 的种群遗传结构和地理分化:藏南-藏中地区存在冰川避难所的证据。(物种:蛇目游蛇科;地名:青藏高原)
Mol Phylogenet Evol. 2012 May;63(2):396-406. doi: 10.1016/j.ympev.2012.01.014. Epub 2012 Jan 30.
3
The complete mitochondrial genome of the Sichuan hot-spring keel-back (Thermophis zhaoermii; Serpentes: Colubridae) and a mitogenomic phylogeny of the snakes.
四川温泉链蛇(温泉链蛇;有鳞目:游蛇科)的完整线粒体基因组及蛇类的线粒体基因组系统发育研究
Mitochondrial DNA. 2010 Feb;21(1):8-18. doi: 10.3109/19401730903505867.
4
What are the closest relatives of the hot-spring snakes (Colubridae, Thermophis), the relict species endemic to the Tibetan Plateau?温泉蛇(游蛇科,温泉蛇属)是青藏高原特有的孑遗物种,其亲缘关系最近的物种有哪些?
Mol Phylogenet Evol. 2009 Jun;51(3):438-46. doi: 10.1016/j.ympev.2009.02.013. Epub 2009 Feb 26.