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绿色微藻菌株SQ的完整叶绿体基因组

The complete chloroplast genome of the green microalgae strain SQ.

作者信息

Lopez Haydee, Magdaleno Dante, Stephano Jose

机构信息

Facultad de Ciencias Marinas, Universidad Autonoma de Baja California, Ensenada, Mexico.

Facultad de Ciencias, Universidad Autonoma de Baja California, Ensenada, Mexico.

出版信息

Mitochondrial DNA B Resour. 2017 Apr 13;2(1):225-226. doi: 10.1080/23802359.2017.1310610.

Abstract

The complete chloroplast genome of the microalgae strain SQ was determined in this study. The total length of the chloroplast genome is 243,635 bp with 29.73% GC content. The genome is composed by a small single copy (SSC) region of 101,527 bp and a large single-copy region of 107,815 bp separated by two inverted repeats (IR) regions of 17,145 bp. A total of 98 genes were annotated, including 66 coding genes, 3 rRNAs, and 29 tRNAs. This complete plastid genome can be used to elucidate genetic variations in organellar genomes between strains.

摘要

本研究测定了微藻菌株SQ的完整叶绿体基因组。叶绿体基因组全长243,635 bp,GC含量为29.73%。该基因组由一个101,527 bp的小单拷贝(SSC)区域和一个107,815 bp的大单拷贝区域组成,这两个区域被两个17,145 bp的反向重复(IR)区域隔开。总共注释了98个基因,包括66个编码基因、3个rRNA和29个tRNA。这个完整的质体基因组可用于阐明不同菌株之间细胞器基因组的遗传变异。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d661/7800116/bcdf4e6cd11c/TMDN_A_1310610_F0001_B.jpg

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