咖啡树“蓝山”（茜草科）的完整叶绿体基因组。
The complete chloroplast genome of coffee tree, L. 'Blue Mountain' (Rubiaceae).
作者信息
Park Jongsun, Kim Yongsung, Xi Hong, Heo Kyeong-In
机构信息
InfoBoss Co., Ltd., Seolleung-ro, Gangnam-gu, Seoul, Republic of Korea.
InfoBoss Research Center, Seoul, Republic of Korea.
出版信息
Mitochondrial DNA B Resour. 2019 Jul 16;4(2):2436-2437. doi: 10.1080/23802359.2019.1636729.
We presented complete chloroplast genome of BM1 which is 155,189 bp long and has four subregions: 85,159 bp of large single copy (LSC), and 18,135 bp of small single copy (SSC) regions are separated by 25,946 bp of inverted repeat (IR) regions including 131 genes (86 protein-coding genes, 8 rRNAs, and 37 tRNAs). The overall GC content of the chloroplast genome is 37.4% and those in the LSC, SSC, and IR regions are 35.4, 31.3, and 43.0%, respectively. Low level of cultivar specific sequence variations was found among seven coffee chloroplast genomes.
我们展示了BM1的完整叶绿体基因组，其长度为155,189 bp，有四个亚区域：85,159 bp的大单拷贝（LSC）和18,135 bp的小单拷贝（SSC）区域被25,946 bp的反向重复（IR）区域隔开，IR区域包括131个基因（86个蛋白质编码基因、8个rRNA和37个tRNA）。叶绿体基因组的总体GC含量为37.4%，LSC、SSC和IR区域的GC含量分别为35.4%、31.3%和43.0%。在七个咖啡叶绿体基因组中发现了低水平的品种特异性序列变异。
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