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一种芳香型花椒()的完整叶绿体基因组。

The complete chloroplast genome of an aromatic Chinese pepper ().

作者信息

Hou Na, Wang Gang, Feng Shi Jing, Wei An Zhi

机构信息

College of Forestry, Northwest A&F University, Yangling, Shaanxi, China.

Guizhou Academy of Forestry, Guizhou, China.

出版信息

Mitochondrial DNA B Resour. 2017 Dec 20;3(1):26-27. doi: 10.1080/23802359.2017.1419082.

Abstract

The Chinese pepper () is a flowering plant in the family Rutaceae, native to eastern China and Taiwan. Like many other members of the Rutaceae, it is an economically important aromatic crop known for its volatile oil and nutrition. We determined the complete chloroplast genome sequences for using IIumina sequencing. The chloroplast has a total length of 158,461 bp; it consists of a large single copy (LSC) region of 85,568 bp, a small single copy region (SSC) length of 17,603 bp, and an inverted region (IR) of 27,645 bp. The genome encodes 132 annotated genes, including 87 protein-coding genes, 37 tRNA, and 8 rRNA. The overall GC content of the chloroplast genome was 38.5%. A phylogenomic analysis revealed that are clustered with within the genus .

摘要

花椒()是芸香科的一种开花植物,原产于中国东部和台湾。与芸香科的许多其他成员一样,它是一种重要的经济芳香作物,以其挥发油和营养成分而闻名。我们使用Illumina测序确定了的完整叶绿体基因组序列。该叶绿体全长158,461bp;它由一个85,568bp的大单拷贝(LSC)区域、一个17,603bp的小单拷贝区域(SSC)和一个27,645bp的反向区域(IR)组成。该基因组编码132个注释基因,包括87个蛋白质编码基因、37个tRNA和8个rRNA。叶绿体基因组的总体GC含量为38.5%。系统发育基因组分析表明,在属内与聚在一起。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/166d/7799646/37e97280353d/TMDN_A_1419082_F0001_B.jpg

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