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一种重要的观赏和药用蕨类植物(水龙骨科)的完整叶绿体基因组。

The complete chloroplast genome of (Polypodiaceae), an important ornamental and medical fern.

作者信息

Cai Shicheng, Cai Xiang, Li Shufeng, Liu Shanshan, Wang Zhen, Wang Ting, Su Yingjuan

机构信息

School of Life Sciences, Sun Yat-sen University, Guangzhou, China.

College of Life Sciences, Nanjing Agricultural University, Nanjing, China.

出版信息

Mitochondrial DNA B Resour. 2018 Aug 13;3(2):801-802. doi: 10.1080/23802359.2018.1491347.

Abstract

is an important ornamental and medical fern from Polypodiaceae. Its complete chloroplast genome sequence was characterized through assembly with Illumina sequencing data. The genome size is 158,174 bp, with large single copy (LSC, 82,479 bp) and small single copy (SSC, 21,723 bp) regions separated by a pair of inverted repeats (IR, 26,986 bp). A total of 132 genes were identified, including 88 protein coding genes, 35 tRNA genes, eight rRNA genes, and one pseudogene. Maximum-likelihood phylogenetic tree revealed that was most closely related to . The study will greatly facilitate the chloroplast phylogenomics of Polypodiaceae.

摘要

是一种来自水龙骨科的重要观赏和药用蕨类植物。通过对Illumina测序数据进行组装,对其完整的叶绿体基因组序列进行了表征。基因组大小为158,174 bp,具有大单拷贝(LSC,82,479 bp)和小单拷贝(SSC,21,723 bp)区域,由一对反向重复序列(IR,26,986 bp)隔开。共鉴定出132个基因,包括88个蛋白质编码基因、35个tRNA基因、8个rRNA基因和1个假基因。最大似然系统发育树显示,与关系最为密切。该研究将极大地促进水龙骨科的叶绿体系统发育基因组学研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b9fc/7800146/ee1f78999339/TMDN_A_1491347_F0001_C.jpg

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