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绿藻门蕨藻目J. 阿加德的整个叶绿体基因组特征分析

Characterization of the whole chloroplast genome J. Agardh (Bryopsidales, Chlorophyta).

作者信息

Gao Dahai, Huang Chaohua, Yao Jianting, Li Yuhang, Tan Wei, Sun Zhongmin

机构信息

Department of Marine Organism Taxonomy and Phylogeny, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, China.

Guangxi Zhuang Autonomous Region Institute of Product Quality Inspection, Nanning, China.

出版信息

Mitochondrial DNA B Resour. 2018 Oct 31;3(2):1198-1199. doi: 10.1080/23802359.2018.1524274.

DOI:10.1080/23802359.2018.1524274
PMID:33474463
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800522/
Abstract

The whole chloroplast genome (cp DNA) sequence of J. Agardh has been characterized from Illumina pair-end sequencing. The circular cpDNA was 119,402 bp in length, containing 122 genes, which included 91 protein-coding genes, 28 tRNA genes, and 3 ribosomal RNA genes (four rRNA species). The overall AT content of cpDNA is 67.4%. The 48 genes phylogenetic analysis suggested that formed a monophyletic clade with congeneric .

摘要

通过Illumina双端测序对J. Agardh的整个叶绿体基因组（cp DNA）序列进行了表征。环状cpDNA长度为119,402 bp，包含122个基因，其中包括91个蛋白质编码基因、28个tRNA基因和3个核糖体RNA基因（四种rRNA种类）。cpDNA的总体AT含量为67.4%。48个基因的系统发育分析表明， 与同属的 形成了一个单系分支。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b38/7800522/bd0e33e98a7d/TMDN_A_1524274_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b38/7800522/bd0e33e98a7d/TMDN_A_1524274_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b38/7800522/bd0e33e98a7d/TMDN_A_1524274_F0001_B.jpg

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Molecular phylogeny and barcoding of Caulerpa (Bryopsidales) based on the tufA, rbcL, 18S rDNA and ITS rDNA genes.基于tufA、rbcL、18S rDNA和ITS rDNA基因的羽藻属（蕨藻目）分子系统发育与条形码研究
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