Department of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada.
Protein Sci. 2021 Mar;30(3):678-692. doi: 10.1002/pro.4028. Epub 2021 Feb 5.
Late embryogenesis abundant (LEA) proteins are produced during seed embryogenesis and in vegetative tissue in response to various abiotic stressors. A correlation has been established between LEA expression and stress tolerance, yet their precise biochemical mechanism remains elusive. LEA proteins are very rich in hydrophilic amino acids, and they have been found to be intrinsically disordered proteins (IDPs) in vitro. Here, we perform biochemical and structural analyses of the four LEA3 proteins from Arabidopsis thaliana (AtLEA3). We show that the LEA3 proteins are disordered in solution but have regions with propensity for order. All LEA3 proteins were effective cryoprotectants of LDH in the freeze/thaw assays, while only one member, AtLEA3-4, was shown to bind Cu and Fe ions with micromolar affinity. As well, only AtLEA3-4 showed binding and a gain in α-helicity in the presence of the membrane mimic dodecylphosphocholine (DPC). We explored this interaction in greater detail using N-heteronuclear single quantum coherence (HSQC) nuclear magnetic resonance, and demonstrate that two sets of conserved motifs present in AtLEA3-4 are involved in the interaction with the DPC micelles, which themselves gain α-helical structure.
晚期胚胎丰富蛋白(LEA)在种子胚胎发生过程中和在植物组织中产生,以响应各种非生物胁迫。已经建立了 LEA 表达与应激耐受性之间的相关性,但它们的确切生化机制仍然难以捉摸。LEA 蛋白富含亲水氨基酸,并且在体外被发现是固有无序蛋白(IDP)。在这里,我们对拟南芥的四个 LEA3 蛋白进行了生化和结构分析。我们表明,LEA3 蛋白在溶液中是无序的,但具有有序倾向的区域。所有的 LEA3 蛋白在冷冻/解冻试验中都是有效的 LDH 冷冻保护剂,而只有一个成员,AtLEA3-4,被证明以微摩尔亲和力结合 Cu 和 Fe 离子。同样,只有 AtLEA3-4 在存在膜模拟物十二烷基磷酸胆碱(DPC)时显示出结合和α-螺旋增加。我们使用 N-异核单量子相干(HSQC)核磁共振更详细地研究了这种相互作用,并证明 AtLEA3-4 中存在的两组保守基序参与了与 DPC 胶束的相互作用,而 DPC 胶束本身获得了α-螺旋结构。