Mushtaq Hina, Jehangir Arshid, Ganai Shabir Ahmad, Farooq Saleem, Ganai Bashir Ahmad, Nazir Ruqeya
Department of Environmental Science, University of Kashmir, Srinagar, Jammu & Kashmir 190006, India.
Division of Basic Sciences and Humanities, Faculty of Agriculture, SKUAST-Kashmir, Sopore 193201, Jammu & Kashmir, India.
Biomolecules. 2021 Jan 18;11(1):117. doi: 10.3390/biom11010117.
A novel temperature stable alkaline protease yielding bacteria was isolated from the soils of Dachigam National Park, which is known to be inhabited by a wide variety of endemic plant and animal species of Western Himalaya. This high-potential protease producing isolate was characterized and identified as strain HM48 by morphological, Gram's staining and biochemical techniques followed by molecular characterization using 16S rRNA approach. The extracellular protease of HM48 was purified by precipitating with ammonium sulfate (80%), followed by dialysis and Gel filtration chromatography increasing its purity by 5.8-fold. The SDS-PAGE analysis of the purified enzyme confirmed a molecular weight of about ≈25 kDa. The enzyme displayed exceptional activity in a broad temperature range (10-90 °C) at pH 8.0, retaining its maximum at 70 °C, being the highest reported for this proteolytic sp., with K and V of 11.71 mg/mL and 357.14 µmol/mL/min, respectively. The enzyme exhibited remarkable activity and stability against various metal ions, surfactants, oxidizing agent (HO), organic solvents and displayed outstanding compatibility with widely used detergents. This protease showed effective wash performance by exemplifying complete blood and egg-yolk stains removal at 70 °C and efficiently disintegrated chicken feathers making it of vital importance for laundry purpose and waste management. For functional analysis, protease gene amplification of strain HM48 yielded a nucleotide sequence of about 700 bp, which, when checked against the available sequences in NCBI, displayed similarity with subtilisin-like serine protease of . The structure of this protease and its highest-priority substrate β-casein was generated through protein modeling. These protein models were validated through futuristic algorithms following which protein-protein (protease from HM48 and β-casein) docking was performed. The interaction profile of these proteins in the docked state with each other was also generated, shedding light on their finer details. Such attributes make this thermally stable protease novel and suitable for high-temperature industrial and environmental applications.
从 Dachigam 国家公园的土壤中分离出一种新型的温度稳定碱性蛋白酶产生菌,该公园以栖息着西喜马拉雅山脉的多种特有动植物物种而闻名。通过形态学、革兰氏染色和生化技术对这种具有高潜力的蛋白酶产生菌进行了表征和鉴定,并将其确定为 HM48 菌株,随后使用 16S rRNA 方法进行分子表征。HM48 的细胞外蛋白酶通过硫酸铵(80%)沉淀、透析和凝胶过滤色谱进行纯化,其纯度提高了 5.8 倍。纯化酶的 SDS-PAGE 分析证实分子量约为 25 kDa。该酶在 pH 8.0 的宽温度范围(10 - 90 °C)内表现出优异的活性,在 70 °C 时保持最高活性,这是该蛋白水解菌属报道的最高温度,其 Km 和 Vmax 分别为 11.71 mg/mL 和 357.14 µmol/mL/min。该酶对各种金属离子、表面活性剂、氧化剂(H2O2)、有机溶剂表现出显著的活性和稳定性,并与广泛使用的洗涤剂具有出色的兼容性。这种蛋白酶通过在 70 °C 时完全去除血渍和蛋黄污渍以及有效分解鸡毛,展示了有效的洗涤性能,使其在洗衣用途和废物管理方面至关重要。为了进行功能分析,对 HM48 菌株的蛋白酶基因进行扩增,得到了一个约 700 bp 的核苷酸序列,与 NCBI 中可用序列比对时,显示与枯草杆菌蛋白酶样丝氨酸蛋白酶相似。通过蛋白质建模生成了这种蛋白酶及其最高优先级底物β-酪蛋白的结构。这些蛋白质模型通过未来算法进行了验证,随后进行了蛋白质 - 蛋白质(来自 HM48 的蛋白酶和β-酪蛋白)对接。还生成了这些蛋白质在对接状态下相互之间的相互作用图谱,揭示了它们的更精细细节。这些特性使这种热稳定蛋白酶具有新颖性,适用于高温工业和环境应用。