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为分布在东亚的日本田鳖(Appasus japonicus)开发微卫星标记。

Development of microsatellite markers for a giant water bug, Appasus japonicus, distributed in East Asia.

机构信息

Faculty of Science, Shinshu University.

Sugadaira Research Station, Mountain Science Center, University of Tsukuba.

出版信息

Genes Genet Syst. 2021 Mar 23;95(6):323-329. doi: 10.1266/ggs.20-00033. Epub 2021 Jan 24.

Abstract

We developed microsatellite markers for Appasus japonicus (Heteroptera: Belostomatidae). This belostomatid bug is distributed in East Asia (Japanese Archipelago, Korean Peninsula and mainland China) and often listed as an endangered species in the Red List or the Red Data Book at the national and local level in Japan. Here, we describe twenty novel polymorphic microsatellite loci developed for A. japonicus, and marker suitability was evaluated using 56 individuals from four A. japonicus populations (Nagano, Hiroshima and Yamaguchi prefectures, Japan, and Chungcheongnam-do, Korea). The number of alleles per locus ranged from 1 to 12 (mean = 2.5), and the average observed and expected heterozygosity and fixation index per locus were 0.270, 0.323 and 0.153, respectively. In addition, a population structure analysis was conducted using the software STRUCTURE, and its result suggested that the 20 markers described here will be useful for investigating the genetic structure of A. japonicus populations, which should contribute to population genetics studies of this species.

摘要

我们开发了用于日本龙虱(半翅目:龙虱科)的微卫星标记。这种龙虱分布于东亚(日本列岛、朝鲜半岛和中国大陆),在日本的国家和地方红名单或红色数据书中常被列为濒危物种。在这里,我们描述了为 A. japonicus 开发的二十个新的多态性微卫星基因座,并使用来自日本长野、广岛和山口县以及韩国忠清南道的四个 A. japonicus 种群的 56 个个体评估了标记的适用性。每个基因座的等位基因数从 1 到 12 不等(平均值为 2.5),每个基因座的平均观察和预期杂合度和固定指数分别为 0.270、0.323 和 0.153。此外,使用 STRUCTURE 软件进行了种群结构分析,其结果表明,这里描述的 20 个标记将有助于研究 A. japonicus 种群的遗传结构,这将有助于该物种的种群遗传学研究。

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