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线虫内寄生真菌的线粒体基因组

The mitochondrial genome of the nematode endoparasitic fungus .

作者信息

Wang Niuniu, Zhang Yongjie, Hussain Muzammil, Li Kuan, Xiang Meichun, Liu Xingzhong

机构信息

State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.

University of Chinese Academy of Sciences, Beijing, China.

出版信息

Mitochondrial DNA B Resour. 2016 Feb 10;1(1):114-115. doi: 10.1080/23802359.2016.1143336.

DOI:10.1080/23802359.2016.1143336
PMID:33490390
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800308/
Abstract

In this study, we report the complete mitochondrial genome of (Ophiocordycipitaceae, Hypocreales, Ascomycota). We construct the mitochondrial DNA genome organization of 62 483 bp in length of by using the whole-genome resequencing method. Conserved genes including the large and small rRNA subunits, 26 tRNA and 14 protein-coding genes are identified. These protein-coding genes utilize ATG, GTG or TTG as initiation codons and TAA or TAG as termination codons. Moreover, we detect 10 group I introns and one unclassified intron in six genes (, , , , and ) encoding ORFs of ribosomal protein S3 and GIY-YIG/LAGLIDADG endonucleases or hypothetical proteins. This mitochondrial genome will be useful in understanding the distribution and genetic diversity of this species.

摘要

在本研究中,我们报道了(麦角菌科,肉座菌目,子囊菌门)的完整线粒体基因组。我们采用全基因组重测序方法构建了长度为62483 bp的线粒体DNA基因组结构。鉴定出了包括大、小rRNA亚基、26个tRNA和14个蛋白质编码基因在内的保守基因。这些蛋白质编码基因使用ATG、GTG或TTG作为起始密码子,TAA或TAG作为终止密码子。此外,我们在编码核糖体蛋白S3和GIY-YIG/LAGLIDADG核酸内切酶或假定蛋白的六个基因(、、、、和)中检测到10个I类内含子和一个未分类内含子。该线粒体基因组将有助于了解该物种的分布和遗传多样性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad65/7800308/5804894d2f9d/TMDN_A_1143336_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad65/7800308/5804894d2f9d/TMDN_A_1143336_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad65/7800308/5804894d2f9d/TMDN_A_1143336_F0001_B.jpg

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本文引用的文献

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Sci Rep. 2015 Sep 15;5:13892. doi: 10.1038/srep13892.
2
Development of a transformation system for Hirsutella spp. and visualization of the mode of nematode infection by GFP-labeled H. minnesotensis.被毛孢属真菌转化系统的开发以及绿色荧光蛋白标记的明尼苏达被毛孢对线虫感染模式的可视化
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The complete mitochondrial genome of the nematode endoparasitic fungus Hirsutella minnesotensis.
线粒体基因组学、系统发育学和形态学揭示了一种来自中国的昆虫病原真菌新物种。
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Plants and Associated Soil Microbiota Cooperatively Suppress Plant-Parasitic Nematodes.植物及其相关土壤微生物群协同抑制植物寄生线虫。
Front Microbiol. 2020 Feb 28;11:313. doi: 10.3389/fmicb.2020.00313. eCollection 2020.
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