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从国际空间站分离出的菌株的基因组和功能特征及其致病潜力

Genomic and Functional Characterization of Isolates Recovered From the International Space Station and Their Potential for Pathogenicity.

作者信息

Bryan Noelle C, Lebreton Francois, Gilmore Michael, Ruvkun Gary, Zuber Maria T, Carr Christopher E

机构信息

Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA, United States.

Department of Ophthalmology, Massachusetts Eye and Ear Infirmary, Boston, MA, United States.

出版信息

Front Microbiol. 2021 Jan 11;11:515319. doi: 10.3389/fmicb.2020.515319. eCollection 2020.

Abstract

is a multidrug resistant, opportunistic human pathogen and a leading cause of hospital acquired infections. Recently, isolates have been recovered from the air and surfaces onboard the International Space Station (ISS). Pangenomic and functional analyses were carried out to assess their potential impact on astronaut health. Genomes of each ISS isolate, and both clinical and commensal reference strains, were evaluated for their core and unique gene content, acquired antibiotic resistance genes, phage, plasmid content, and virulence traits. In order to determine their potential survival when outside of the human host, isolates were also challenged with three weeks of desiccation at 30% relative humidity. Finally, pathogenicity of the ISS strains was evaluated in the model organism At the culmination of this study, there were no defining signatures that separated known pathogenic strains from the more commensal phenotypes using the currently available resources. As a result, the current reliance on database information alone must be shifted to experimentally evaluated genotypic and phenotypic characteristics of clinically relevant microorganisms.

摘要

是一种多重耐药的机会性人类病原体,也是医院获得性感染的主要原因。最近,在国际空间站(ISS)的空气和表面发现了该菌株。进行了全基因组和功能分析,以评估它们对宇航员健康的潜在影响。对每个国际空间站分离株的基因组以及临床和共生参考菌株的基因组进行了评估,分析了它们的核心和独特基因内容、获得的抗生素抗性基因、噬菌体、质粒含量和毒力特征。为了确定它们在离开人类宿主后的潜在存活能力,还将分离株置于30%相对湿度下干燥三周进行挑战。最后,在模式生物中评估了国际空间站菌株的致病性。在这项研究结束时,使用现有的资源,没有明确的特征能够将已知的致病菌株与更具共生性的表型区分开来。因此,目前仅依赖数据库信息的做法必须转向对临床相关微生物进行实验评估的基因型和表型特征。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/98bf/7829349/9dac790ab9d5/fmicb-11-515319-g001.jpg

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