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骨髓基质细胞衍生的外泌体 miR-10a 和 miR-16 可能通过调节 EphA8 或 IGF1R/CCND1 参与多发性骨髓瘤患者的进展。

Bone marrow stromal cells derived exosomal miR-10a and miR-16 may be involved in progression of patients with multiple myeloma by regulating EPHA8 or IGF1R/CCND1.

机构信息

Department of Hematology, Zhejiang Provincial People's Hospital, Hangzhou, China.

出版信息

Medicine (Baltimore). 2021 Jan 29;100(4):e23447. doi: 10.1097/MD.0000000000023447.

Abstract

Interaction with bone marrow stromal cells (BMSCs) has been suggested as an important mechanism for the progression of multiple myeloma (MM) cells, while exosomes are crucial mediators for cell-to-cell communication. The study was to investigate the miRNA profile changes in exosomes released by BMSCs of MM patients and explore their possible function roles.The microarray datasets of exosomal miRNAs in BMSCs were downloaded from the Gene Expression Omnibus database (GSE110271: 6 MM patients, 2 healthy donors; GSE78865: 4 donors and 2 MM patients; GSE39571: 7 MM patients and 4 controls). The differentially expressed miRNAs (DEMs) were identified using the LIMMA method. The target genes of DEMs were predicted by the miRwalk 2.0 database and the hub genes were screened by constructing the protein-protein interaction (PPI) network, module analysis and overlapping with the differentially expressed genes (DEGs) after overexpression or knockout of miRNAs.Three downregulated DEMs were found to distinguish MM from normal and MM-MGUS controls in the GSE39571 dataset; one downregulated and one upregulated DEMs (hsa-miR-10a) could differentiate MM from normal and MM-MGUS controls in the GSE110271-GSE78865 merged dataset. Furthermore, 11 downregulated (hsa-miR-16) and 1 upregulated DEMs were shared between GSE39571 and merged dataset when comparing MM with normal samples. The target genes were predicted for these 17 DEMs. PPI with module analysis showed IGF1R and CCND1 were hub genes and regulated by hsa-miR-16. Furthermore, EPHA8 was identified as a DEG that was downregulated in MM cells when the use of has-miR-10a mimics; while IGF1R, CCND1, CUL3, and ELAVL1 were also screened as DEGs that were upregulated in MM cells when silencing of hsa-miR-16.BMSCs-derived exosomal miR-10a and miR-16 may be involved in MM progression by regulating EPHA8 or IGF1R/CCND1/CUL3/ELAVL1, respectively. These exosomal miRNAs or genes may represent potential biomarkers for diagnosis of MM and prediction of progression and targets for developing therapeutic drugs.

摘要

骨髓基质细胞(BMSCs)与多发性骨髓瘤(MM)细胞的相互作用被认为是其进展的重要机制,而外泌体则是细胞间通讯的关键介质。本研究旨在探讨 MM 患者 BMSCs 来源的外泌体中 miRNA 谱的变化,并探索其可能的功能作用。

从基因表达综合数据库(GSE110271:6 例 MM 患者,2 例健康供者;GSE78865:4 例供者和 2 例 MM 患者;GSE39571:7 例 MM 患者和 4 例对照)中下载 BMSCs 来源的外泌体 miRNA 的微阵列数据集。使用 LIMMA 方法鉴定差异表达 miRNA(DEMs)。通过 miRwalk 2.0 数据库预测 DEMs 的靶基因,通过构建蛋白质-蛋白质相互作用(PPI)网络、模块分析和与 miRNA 过表达或敲除后差异表达基因(DEGs)的重叠,筛选出核心基因。

在 GSE39571 数据集,发现 3 个下调的 DEMs 可区分 MM 与正常和 MM-MGUS 对照;在 GSE110271-GSE78865 合并数据集,1 个下调和 1 个上调的 DEM(hsa-miR-10a)可区分 MM 与正常和 MM-MGUS 对照。此外,在比较 MM 与正常样本时,GSE39571 和合并数据集共有 11 个下调(hsa-miR-16)和 1 个上调的 DEM。为这 17 个 DEMs 预测了靶基因。PPI 与模块分析表明,IGF1R 和 CCND1 是核心基因,受 hsa-miR-16 调控。此外,当使用 hsa-miR-10a 模拟物时,EPHA8 被鉴定为 MM 细胞中下调的 DEG;而当沉默 hsa-miR-16 时,IGF1R、CCND1、CUL3 和 ELAVL1 也被筛选为 MM 细胞中上调的 DEG。

BMSCs 来源的外泌体 miR-10a 和 miR-16 可能分别通过调节 EPHA8 或 IGF1R/CCND1/CUL3/ELAVL1 参与 MM 进展。这些外泌体 miRNA 或基因可能代表 MM 诊断、进展预测的潜在生物标志物和开发治疗药物的靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/019c/7850735/79a8dfed2fc2/medi-100-e23447-g001.jpg

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