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小 RNA 指导的 DNA 消除:分子机制及其在基因组编辑中的潜力。

Small RNA-directed DNA elimination: the molecular mechanism and its potential for genome editing.

机构信息

Department of BioNanoScience, Kavli Institute of Nanoscience, Delft University of Technology, Delft, The Netherlands.

出版信息

RNA Biol. 2021 Nov;18(11):1540-1545. doi: 10.1080/15476286.2021.1885208. Epub 2021 Feb 8.

DOI:10.1080/15476286.2021.1885208
PMID:33530834
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8583303/
Abstract

Transposable elements have both detrimental and beneficial effects on their host genome. is a unicellular eukaryote that deals with transposable elements in a unique way. It has a separate somatic and germline genome in two nuclei in a single cell. During sexual reproduction, a small RNA directed system compares the germline and somatic genome to identify transposable elements and related sequences. These are subsequently marked by heterochromatin and excised. In this Review, current knowledge of this system and the gaps therein are discussed. Additionally, the possibility to exploit the machinery for genome editing and its advantages over the widely used CRISPR-Cas9 system will be explored. While the bacterial derived CRISPR-Cas9 has difficulty to access eukaryotic chromatin, proteins are adept at acting in a chromatin context. Furthermore, based gene therapy in humans might be a safer alternative to Cas9 because the latter can trigger an immune response.

摘要

转座元件对其宿主基因组既有有害影响,也有有益影响。 是一种单细胞真核生物,它以独特的方式处理转座元件。它在单个细胞的两个核中有一个单独的体细胞和生殖体基因组。在有性生殖过程中,一个小的 RNA 导向系统将生殖体和体细胞基因组进行比较,以识别转座元件和相关序列。随后,这些序列被异染色质标记并切除。在这篇综述中,将讨论该系统的现有知识及其存在的空白。此外,还将探讨利用 机制进行基因组编辑的可能性及其相对于广泛使用的 CRISPR-Cas9 系统的优势。虽然源自细菌的 CRISPR-Cas9 难以进入真核染色质,但 蛋白善于在染色质环境中发挥作用。此外,基于 的人类基因治疗可能是 Cas9 的更安全替代品,因为后者会引发免疫反应。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2c0/8583303/4ac91b195d61/KRNB_A_1885208_F0003_OC.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2c0/8583303/09122eba48b8/KRNB_A_1885208_F0001_OC.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2c0/8583303/821936f09170/KRNB_A_1885208_F0002_OC.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2c0/8583303/4ac91b195d61/KRNB_A_1885208_F0003_OC.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2c0/8583303/09122eba48b8/KRNB_A_1885208_F0001_OC.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2c0/8583303/821936f09170/KRNB_A_1885208_F0002_OC.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2c0/8583303/4ac91b195d61/KRNB_A_1885208_F0003_OC.jpg

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本文引用的文献

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2
Identification of preexisting adaptive immunity to Cas9 proteins in humans.鉴定人类对 Cas9 蛋白的预先存在的适应性免疫。
Nat Med. 2019 Feb;25(2):249-254. doi: 10.1038/s41591-018-0326-x. Epub 2019 Jan 28.
3
Six domesticated PiggyBac transposases together carry out programmed DNA elimination in .
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Elife. 2018 Sep 18;7:e37927. doi: 10.7554/eLife.37927.
4
Whats, hows and whys of programmed DNA elimination in .DNA 程序化消除的来龙去脉。
Open Biol. 2017 Oct;7(10). doi: 10.1098/rsob.170172.
5
Diversification of HP1-like Chromo Domain Proteins in Tetrahymena thermophila.嗜热四膜虫中类HP1染色质结构域蛋白的多样化
J Eukaryot Microbiol. 2018 Jan;65(1):104-116. doi: 10.1111/jeu.12443. Epub 2017 Aug 3.
6
Negative Regulators of an RNAi-Heterochromatin Positive Feedback Loop Safeguard Somatic Genome Integrity in Tetrahymena.RNAi-异染色质正反馈环的负调控因子保障了四膜虫的体细胞基因组完整性
Cell Rep. 2017 Mar 7;18(10):2494-2507. doi: 10.1016/j.celrep.2017.02.024.
7
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8
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