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单价离子在 OPC3、OPC、TIP3P-FB 和 TIP4P-FB 水模型中的参数化。

Parameterization of Monovalent Ions for the OPC3, OPC, TIP3P-FB, and TIP4P-FB Water Models.

机构信息

Department of Chemistry, Michigan State University, East Lansing, Michigan 48824, United States.

Department of Chemistry, Yale University, New Haven, Connecticut 06511, United States.

出版信息

J Chem Inf Model. 2021 Feb 22;61(2):869-880. doi: 10.1021/acs.jcim.0c01390. Epub 2021 Feb 4.

Abstract

Monovalent ions play significant roles in various biological and material systems. Recently, four new water models (OPC3, OPC, TIP3P-FB, and TIP4P-FB), with significantly improved descriptions of condensed phase water, have been developed. The pairwise interaction between the metal ion and water necessitates the development of ion parameters specifically for these water models. Herein, we parameterized the 12-6 and the 12-6-4 nonbonded models for 12 monovalent ions with the respective four new water models. These monovalent ions contain eight cations including alkali metal ions (Li, Na, K, Rb, Cs), transition-metal ions (Cu and Ag), and Tl from the boron family, along with four halide anions (F, Cl, Br, I). Our parameters were designed to reproduce the target hydration free energies (the 12-6 hydration free energy (HFE) set), the ion-oxygen distances (the 12-6 ion-oxygen distance (IOD) set), or both of them (the 12-6-4 set). The 12-6-4 parameter set provides highly accurate structural features overcoming the limitations of the routinely used 12-6 nonbonded model for ions. Specifically, we note that the 12-6-4 parameter set is able to reproduce experimental hydration free energies within 1 kcal/mol and experimental ion-oxygen distances within 0.01 Å simultaneously. We further reproduced the experimentally determined activity derivatives for salt solutions, validating the ion parameters for simulations of ion pairs. The improved performance of the present water models over our previous parameter sets for the TIP3P, TIP4P, and SPC/E water models (Li, P. et al 2015 11 1645 1657) highlights the importance of the choice of water model in conjunction with the metal ion parameter set.

摘要

单价离子在各种生物和材料系统中起着重要作用。最近,开发了四种新的水模型(OPC3、OPC、TIP3P-FB 和 TIP4P-FB),它们对凝聚相水的描述有了显著的改善。金属离子与水之间的相互作用需要为这些水模型专门开发离子参数。在这里,我们用这四种新的水模型参数化了 12-6 和 12-6-4 非键模型的 12 种单价离子。这些单价离子包含八种阳离子,包括碱金属离子(Li、Na、K、Rb、Cs)、过渡金属离子(Cu 和 Ag)以及硼族的 Tl,以及四种卤化物阴离子(F、Cl、Br、I)。我们的参数旨在再现目标水合自由能(12-6 水合自由能(HFE)集)、离子-氧距离(12-6 离子-氧距离(IOD)集)或两者(12-6-4 集)。12-6-4 参数集提供了高度准确的结构特征,克服了离子常用的 12-6 非键模型的局限性。具体来说,我们注意到 12-6-4 参数集能够同时再现实验水合自由能在 1 kcal/mol 以内和实验离子-氧距离在 0.01 Å 以内。我们进一步再现了盐溶液中实验确定的活度导数,验证了离子参数用于离子对模拟。与我们之前针对 TIP3P、TIP4P 和 SPC/E 水模型(Li、P. 等人,2015 年 11 月 1645 年 1657 年)的参数集相比,这些水模型的性能得到了提高,突出了水模型选择与金属离子参数集的重要性。

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