School of Chemical and Energy Engineering, Faculty of Engineering, Universiti Teknologi Malaysia, 81210, Skudai, Johor Darul Takzim, Malaysia; Department of Biological Sciences and Biotechnology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, 43600, Bangi, Selangor Darul Ehsan, Malaysia.
Institute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia, 43600, Bangi, Selangor Darul Ehsan, Malaysia.
J Biotechnol. 2021 Mar 10;329:118-127. doi: 10.1016/j.jbiotec.2021.01.019. Epub 2021 Feb 1.
Dehydroquinase or 3-dehydroquinate dehydratase (DHQD) reversibly cleaves 3-dehydroquinate to form 3-dehydroshikimate. Here, we describe the functional and structural features of a cold active type II 3-dehydroquinate dehydratase from the psychrophilic yeast, Glaciozyma antarctica PI12 (GaDHQD). Functional studies showed that the enzyme was active at low temperatures (10-30 °C), but displayed maximal activity at 40 °C. Yet the enzyme was stable over a wide range of temperatures (10-70 °C) and between pH 6.0-10.0 with an optimum pH of 8.0. Interestingly, the enzyme was highly thermo-tolerant, denaturing only at approximately 84 °C. Three-dimensional structure analyses showed that the G. antarctica dehydroquinase (GaDHQD) possesses psychrophilic features in comparison with its mesophilic and thermophilic counterparts such as higher numbers of non-polar residues on the surface, lower numbers of arginine and higher numbers of glycine-residues with lower numbers of hydrophobic interactions. On the other hand, GaDHQD shares some traits (i.e. total number of hydrogen bonds, number of proline residues and overall folding) with its mesophilic and thermophilic counterparts. Combined, these features contribute synergistically towards the enzyme's ability to function at both low and high temperatures.
脱氢奎宁或 3-脱氢奎宁脱水酶(DHQD)可将 3-脱氢奎宁可逆地切割成 3-脱氢莽草酸。在这里,我们描述了来自嗜冷酵母南极 Glaciozyma PI12(GaDHQD)的冷活性 II 型 3-脱氢奎宁脱水酶的功能和结构特征。功能研究表明,该酶在低温(10-30°C)下具有活性,但在 40°C 时显示出最大活性。然而,该酶在很宽的温度范围(10-70°C)和 pH 值 6.0-10.0 之间都很稳定,最适 pH 值为 8.0。有趣的是,该酶具有高度的耐热性,仅在约 84°C 时变性。三维结构分析表明,与嗜温和嗜热的同系物相比,南极假丝酵母的脱羟奎宁(GaDHQD)具有嗜冷特征,例如表面上有更多的非极性残基,较少的精氨酸和更多的甘氨酸残基,并且疏水性相互作用较少。另一方面,GaDHQD 与它的嗜温和嗜热的同系物具有一些特征(例如氢键总数,脯氨酸残基的数量和整体折叠)。综合这些特征有助于该酶在低温和高温下的功能。