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丽鱼科鱼类B染色体的基因组概览。

A genomic glimpse of B chromosomes in cichlids.

作者信息

Martins Cesar, Jehangir Maryam

机构信息

Department of Structural and Functional Biology, Institute of Biosciences at Botucatu, São Paulo State University (UNESP), Botucatu, SP, 18618-689, Brazil.

出版信息

Genes Genomics. 2021 Mar;43(3):199-208. doi: 10.1007/s13258-021-01049-4. Epub 2021 Feb 6.

Abstract

BACKGROUND

B chromosomes (Bs) are extra karyotype elements in addition to A chromosomes and are found in all major eukaryotic taxa. Among hundreds of investigated species, cichlid fishes have emerged as an interesting group of model and have contributed to unravel the complex biology of B chromosome.

OBJECTIVE

We review the current state of knowledge on B chromosome investigation in cichlid fish and discuss the recent genomic advances over gene and sequences hunting on Bs and their impact on the current concept of B chromosomes.

RESULTS

The Bs of cichlids have been under the subject of classical cytogenetics and high scale DNA, RNA and epigenetics analysis and a list of B chromosome genes and functional sequences has been generated. B chromosomes of cichlids are restricted to females in some species and are enriched with genes, relics of genes, transposable elements and sequences transcribing for many significant biological functions. Diverse potentially functional sequences have been described in the B chromosome of cichlids and could influence important biological characteristics as well seems to affect transcription and epigenetic modifications of the whole genome.

CONCLUSION

One of the most enigmatic characteristics of Bs in cichlids is their genic content related to cell cycle and chromosome structure, and their influence over sex rates. The relationship of Bs with cell cycle and sex determination looks like to be connected with the drive of the Bs during cell divisions.

摘要

背景

B染色体(Bs)是除A染色体外的额外核型元件,存在于所有主要的真核生物类群中。在数百个已研究的物种中,丽鱼科鱼类已成为一组有趣的模式生物,并有助于揭示B染色体复杂的生物学特性。

目的

我们综述了丽鱼科鱼类B染色体研究的现状,并讨论了在B染色体上寻找基因和序列方面的最新基因组进展及其对当前B染色体概念的影响。

结果

丽鱼科鱼类的B染色体一直是经典细胞遗传学以及大规模DNA、RNA和表观遗传学分析的研究对象,并且已经产生了一份B染色体基因和功能序列清单。丽鱼科鱼类的B染色体在某些物种中仅限于雌性,并且富含基因、基因遗迹、转座元件以及转录多种重要生物学功能的序列。丽鱼科鱼类的B染色体中已经描述了多种潜在的功能序列,它们可能影响重要的生物学特性,似乎也会影响整个基因组的转录和表观遗传修饰。

结论

丽鱼科鱼类B染色体最神秘的特征之一是它们与细胞周期和染色体结构相关的基因含量,以及它们对性别比例的影响。B染色体与细胞周期和性别决定的关系似乎与细胞分裂过程中B染色体的驱动有关。

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