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用靶向微小RNA miR-101-3p和miR-145-5p的肽核酸(PNA)处理人气道上皮Calu-3细胞对微小RNA组的差异影响:下一代测序数据集

Differential effects on the miRNome of the treatment of human airway epithelial Calu-3 cells with peptide-nucleic acids (PNAs) targeting microRNAs miR-101-3p and miR-145-5p: Next generation sequencing datasets.

作者信息

Gasparello Jessica, Fabbri Enrica, Gambari Roberto, Finotti Alessia

机构信息

Department of Life Sciences and Biotechnology, Ferrara University, 44121 Ferrara, Italy.

Research Center on Innovative Therapy for Cystic Fibrosis, Ferrara University, 44121 Ferrara, Italy.

出版信息

Data Brief. 2021 Jan 9;35:106718. doi: 10.1016/j.dib.2021.106718. eCollection 2021 Apr.

DOI:10.1016/j.dib.2021.106718
PMID:33553515
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7846929/
Abstract

Since the demonstration that microRNAs are deeply involved in the regulation of Cystic Fibrosis (CF) Transmembrane Conductance Regulator (CFTR) gene, a great attention has been dedicated to possible alteration of the CFTR gene expression by targeting miRNAs causing down-regulation of CFTR and CFTR-associated proteins. The data here presented are related to previously published studies on the effects of treatment of human bronchial cells of PNAs targeting miR-101-3p and miR-145-5p (microRNAs shown to regulate the CFTR mRNA). These data here presented are relative to two companion articles "Treatment of human airway epithelial Calu-3 cells with a Peptide-Nucleic Acid (PNA) targeting the microRNA miR-101-3p is associated with increased expression of the Cystic Fibrosis Transmembrane Conductance Regulator (CFTR) gene" (published in European Journal of Medicinal Chemistry, 2020) and "Peptide Nucleic Acids for MicroRNA Targeting" (published in Methods in Molecular Biology, 2020). The data obtained indicate that, while the expression of most microRNAs is not affected by PNA treatment, some of them are strongly modulated. In particular, some microRNAs involved in CF and/or CFTR regulation are co-inhibited by miR-101-3p and miR-145-5p. Among them, miR-155-5p, miR-125b-5p, miR-132-3p and miR-6873-3p. This has been demonstrated by Next Generation Sequencing (NGS) followed by RT-qPCR and RT-ddPCR validation.

摘要

自从证明微小RNA深度参与囊性纤维化(CF)跨膜传导调节因子(CFTR)基因的调控以来,人们一直高度关注通过靶向微小RNA导致CFTR和CFTR相关蛋白下调来改变CFTR基因表达的可能性。这里呈现的数据与之前发表的关于用靶向miR-101-3p和miR-145-5p的肽核酸(PNA)处理人支气管细胞的效果的研究有关(这两种微小RNA已被证明可调节CFTR mRNA)。这里呈现的数据与两篇配套文章相关,分别是《用靶向微小RNA miR-101-3p的肽核酸(PNA)处理人气道上皮Calu-3细胞与囊性纤维化跨膜传导调节因子(CFTR)基因表达增加相关》(发表于《欧洲药物化学杂志》,2020年)和《用于靶向微小RNA的肽核酸》(发表于《分子生物学方法》,2020年)。获得的数据表明,虽然大多数微小RNA的表达不受PNA处理的影响,但其中一些受到强烈调节。特别是,一些参与CF和/或CFTR调节的微小RNA被miR-101-3p和miR-145-5p共同抑制。其中包括miR-155-5p、miR-125b-5p、miR-132-3p和miR-6873-3p。这已通过下一代测序(NGS),随后进行RT-qPCR和RT-ddPCR验证得到证实。

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本文引用的文献

1
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Eur J Med Chem. 2021 Jan 1;209:112876. doi: 10.1016/j.ejmech.2020.112876. Epub 2020 Oct 2.
2
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Methods Mol Biol. 2020;2105:199-215. doi: 10.1007/978-1-0716-0243-0_12.
3
A Peptide Nucleic Acid against MicroRNA miR-145-5p Enhances the Expression of the Cystic Fibrosis Transmembrane Conductance Regulator (CFTR) in Calu-3 Cells.
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Anti-tumor Activity of miniPEG-γ-Modified PNAs to Inhibit MicroRNA-210 for Cancer Therapy.用于癌症治疗的微型聚乙二醇化γ修饰肽核酸抑制微小RNA-210的抗肿瘤活性
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