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的完整叶绿体基因组序列:基因组结构与基因组资源。 你提供的原文似乎不太完整,“The complete chloroplast genome sequence of :”这里冒号前缺少具体内容。

The complete chloroplast genome sequence of : genome structure and genomic resources.

作者信息

Cui Xuejun, Wang Xingong, Wang Yanjie, Yuan Qingjun, Shen Ye, Liu Linde

机构信息

School of Life Sciences, Ludong University, Yantai, China.

Department of Traditional Chinese medicine, Shandong College of Traditional Chinese Medicine, Yantai, China.

出版信息

Mitochondrial DNA B Resour. 2021 Jan 27;6(1):245-246. doi: 10.1080/23802359.2020.1863870.

DOI:10.1080/23802359.2020.1863870
PMID:33553634
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7850361/
Abstract

is used as traditional Chinese medicine. In this study, we report its complete chloroplast genome by Illumina pair-end sequencing. The total chloroplast (cp) genome size was 158,094 bp in length, containing a pair of inverted repeats of 26,132 bp, separated by large single-copy and small single-copy regions of 86,508 bp and 19,322 bp, respectively. The chloroplast genome of encodes 113 different genes, including 79 protein-coding genes, 30 transfer RNAs, and 4 ribosomal RNAs. A total of 84 perfect chloroplast microsatellites were analyzed in the . The majority of the SSRs in this chloroplast genome are mononucleotides (66.67%). The reconstructed phylogeny revealed that was sister to the remaining Lardizabalaceae.

摘要

被用作中药。在本研究中,我们通过Illumina双端测序报告了其完整的叶绿体基因组。叶绿体(cp)基因组总长度为158,094 bp,包含一对26,132 bp的反向重复序列,分别被86,508 bp的大单拷贝区域和19,322 bp的小单拷贝区域隔开。该叶绿体基因组编码113个不同的基因,包括79个蛋白质编码基因、30个转运RNA和4个核糖体RNA。在该基因组中总共分析了84个完美的叶绿体微卫星。该叶绿体基因组中的大多数简单序列重复(SSRs)是单核苷酸(66.67%)。重建的系统发育表明,该物种与其余木通科植物互为姐妹关系。

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本文引用的文献

1
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Genome Biol. 2020 Sep 10;21(1):241. doi: 10.1186/s13059-020-02154-5.
2
Interspecific chloroplast genome sequence diversity and genomic resources in Diospyros.柿属植物种间叶绿体基因组序列多样性及基因组资源
BMC Plant Biol. 2018 Sep 26;18(1):210. doi: 10.1186/s12870-018-1421-3.
3
Resolving the systematic positions of enigmatic taxa: Manipulating the chloroplast genome data of Saxifragales.
解决神秘分类群的系统位置问题:操纵虎耳草目叶绿体基因组数据。
Mol Phylogenet Evol. 2018 Sep;126:321-330. doi: 10.1016/j.ympev.2018.04.033. Epub 2018 Apr 24.
4
Phylogenetic Resolution in Based on Complete Chloroplast Genomes and Nuclear DNA Sequences.基于完整叶绿体基因组和核DNA序列的系统发育分辨率
Front Plant Sci. 2017 Jun 30;8:1148. doi: 10.3389/fpls.2017.01148. eCollection 2017.
5
GMATA: An Integrated Software Package for Genome-Scale SSR Mining, Marker Development and Viewing.GMATA:一个用于全基因组规模简单序列重复挖掘、标记开发和查看的集成软件包。
Front Plant Sci. 2016 Sep 13;7:1350. doi: 10.3389/fpls.2016.01350. eCollection 2016.
6
Plann: A command-line application for annotating plastome sequences.Plann:一个用于注释质体基因组序列的命令行应用程序。
Appl Plant Sci. 2015 Aug 10;3(8). doi: 10.3732/apps.1500026. eCollection 2015 Aug.
7
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.RAxML 版本 8:用于系统发育分析和大型系统发育后分析的工具。
Bioinformatics. 2014 May 1;30(9):1312-3. doi: 10.1093/bioinformatics/btu033. Epub 2014 Jan 21.
8
MAFFT multiple sequence alignment software version 7: improvements in performance and usability.MAFFT 多序列比对软件版本 7:性能和易用性的改进。
Mol Biol Evol. 2013 Apr;30(4):772-80. doi: 10.1093/molbev/mst010. Epub 2013 Jan 16.
9
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis.从多序列比对中选择保守区域用于系统发育分析。
Mol Biol Evol. 2000 Apr;17(4):540-52. doi: 10.1093/oxfordjournals.molbev.a026334.