Hernández Marta, López-Urrutia Luis, Abad David, De Frutos Serna Mónica, Ocampo-Sosa Alain A, Eiros José María
Laboratorio de Biología Molecular y Microbiología, Instituto Tecnológico Agrario de Castilla y León (ITACyL), 47071 Valladolid, Spain.
Servicio de Microbiología, Hospital Universitario del Río Hortega, 47012 Valladolid, Spain.
Antibiotics (Basel). 2021 Feb 4;10(2):157. doi: 10.3390/antibiotics10020157.
An extensively drug-resistant (XDR) isolate MS3802 from a tracheostomy exudate was whole-genome sequenced using MiSeq and Oxford Nanopore MinION platforms in order to identify the antimicrobial resistance and virulence determinates and their genomic context. Isolate MS3802 belonged to the clone ST23 and presented a capsular serotype K1, associated with hypervirulent (hvKp) isolates. The isolate harboured a chromosomally encoded gene and contained a large IncHI1B hybrid virulence/resistance plasmid carrying another copy of the and the virulence factors and The carbapenemase gene was found in a Tn-like transposon and the 16S rRNA methylase gen located in the vicinity of other antibiotic-resistant genes on an IncM2 plasmid. This study represents, to the best of our knowledge, the first description of a -, - and -harbouring of ST23 and capsular serotype K1 in Spain. Our report emphasizes the importance of implementing new surveillance strategies to monitor the risk of emergence and spread of such XDR and hypervirulent isolates.
为了鉴定抗菌药物耐药性和毒力决定因素及其基因组背景,使用MiSeq和牛津纳米孔MinION平台对一株来自气管造口术渗出液的广泛耐药(XDR)菌株MS3802进行了全基因组测序。菌株MS3802属于ST23克隆,呈现荚膜血清型K1,与高毒力(hvKp)菌株相关。该菌株携带一个染色体编码基因,并含有一个大型IncHI1B杂交毒力/耐药质粒,该质粒携带该基因的另一个拷贝以及毒力因子和。碳青霉烯酶基因位于一个类似Tn的转座子中,16S rRNA甲基化酶基因位于IncM2质粒上其他抗生素耐药基因附近。据我们所知,本研究首次描述了西班牙一株携带、和的ST23和荚膜血清型K1菌株。我们的报告强调了实施新的监测策略以监测此类XDR和高毒力菌株出现和传播风险的重要性。