School of Biology and Biological Engineering, South China University of Technology, Guangzhou, Guangdong 510006, People's Republic of China.
Biomedical Manufacturing, Commonwealth Scientific and Industrial Research Organization (CSIRO), 343 Royal Parade, Parkville, VIC 3052, Australia.
Acta Crystallogr D Struct Biol. 2021 Feb 1;77(Pt 2):267-277. doi: 10.1107/S2059798320016484. Epub 2021 Feb 2.
Tannases are serine esterases that were first discovered in fungi more than one and half centuries ago. They catalyze the hydrolysis of the gallolyl ester bonds in gallotannins to release gallic acid, which is an important intermediate in the chemical and pharmaceutical industries. Since their discovery, fungal tannases have found wide industrial applications, although there is scarce knowledge about these enzymes at the molecular level, including their catalytic and substrate-binding sites. While this lack of knowledge hinders engineering efforts to modify the enzymes, many tannases have been isolated from various fungal strains in a search for the desired enzymatic properties. Here, the first crystal structure of a fungal tannase, that from Aspergillus niger, is reported. The enzyme possesses a typical α/β-hydrolase-fold domain with a large inserted cap domain, which together form a bowl-shaped hemispherical shape with a surface concavity surrounded by N-linked glycans. Gallic acid is bound at the junction of the two domains within the concavity by forming two hydrogen-bonding networks with neighbouring residues. One is formed around the carboxyl group of the gallic acid and involves residues from the hydrolase-fold domain, including those from the catalytic triad, which consists of Ser206, His485 and Asp439. The other is formed around the three hydroxyl groups of the compound, with the involvement of residues mainly from the cap domain, including Gln238, Gln239, His242 and Ser441. Gallic acid is bound in a sandwich-like mode by forming a hydrophobic contact with Ile442. All of these residues are found to be highly conserved among fungal and yeast tannases.
单宁酶是丝氨酸酯酶,它们于一个半多世纪以前在真菌中首次被发现。它们能够催化水解没食子酰酯键,将水解产物没食子酸释放出来,没食子酸是化学和制药工业的重要中间体。自发现以来,真菌单宁酶已在工业中得到广泛应用,尽管人们对这些酶在分子水平上的了解甚少,包括其催化和底物结合位点。虽然这种缺乏知识阻碍了对酶进行工程改造的努力,但已经从各种真菌菌株中分离出许多单宁酶,以寻找所需的酶学特性。本文首次报道了一种真菌单宁酶,即黑曲霉单宁酶的晶体结构。该酶具有典型的 α/β-水解酶折叠结构域和一个大的插入帽结构域,两者共同形成一个碗状的半球形结构,表面凹陷,周围被 N-连接的聚糖环绕。没食子酸通过与相邻残基形成两个氢键网络,在凹陷处结合在两个结构域的交界处。一个氢键网络形成在没食子酸的羧基周围,涉及水解酶折叠结构域中的残基,包括催化三联体的残基,由 Ser206、His485 和 Asp439 组成。另一个氢键网络形成在化合物的三个羟基周围,主要涉及帽结构域中的残基,包括 Gln238、Gln239、His242 和 Ser441。没食子酸通过与 Ile442 形成疏水接触,以三明治的方式结合。所有这些残基在真菌和酵母单宁酶中都高度保守。