Wodrich Matthew D, Sawatlon Boodsarin, Busch Michael, Corminboeuf Clemence
Laboratory for Computational Molecular Design, Institute of Chemical Sciences and Engineering, Ecole Polytechnique Fédérale de Lausanne (EPFL), 1015 Lausanne, Switzerland.
National Centre for Computational Design and Discovery of Novel Materials (MARVEL), Ecole Polytechnique Fédérale de Lausanne (EPFL), 1015 Lausanne, Switzerland.
Acc Chem Res. 2021 Mar 2;54(5):1107-1117. doi: 10.1021/acs.accounts.0c00857. Epub 2021 Feb 11.
ConspectusFor the past two decades, linear free energy scaling relationships and volcano plots have seen frequent use as computational tools that aid in understanding and predicting the catalytic behavior of heterogeneous and electrocatalysts. Based on Sabatier's principle, which states that a catalyst should bind a substrate neither too strongly nor too weakly, volcano plots provide an estimate of catalytic performance (., overpotential, catalytic cycle thermodynamics/kinetics, .) through knowledge of a descriptor variable. By the use of linear free energy scaling relationships, the value of this descriptor is employed to estimate the relative energies of other catalytic cycle intermediates/transition states. Postprocessing of these relationships leads to a volcano curve that reveals the anticipated performance of each catalyst, with the best species appearing on or near the peak or plateau. While the origin of volcanoes is undoubtedly rooted in examining heterogeneously catalyzed reactions, only recently has this concept been transferred to the realm of homogeneous catalysis. This Account summarizes the work done by our group in implementing and refining "molecular volcano plots" for use in analyzing and predicting the behavior of homogeneous catalysts.We begin by taking the reader through the initial proof-of-principle study that transferred the model from heterogeneous to homogeneous catalysis by examining thermodynamic aspects of a Suzuki-Miyaura cross-coupling reaction. By establishing linear free energy scaling relationships and reproducing the volcano shape, we definitively showed that volcano plots are also valid for homogeneous systems. On the basis of this key finding, we further illustrate how unified pictures of C-C cross-coupling thermodynamics were created using three-dimensional molecular volcanoes.The second section highlights an important transformation from "thermodynamic" to "kinetic" volcanoes by using the descriptor variable to directly estimate transition state barriers. Taking this idea further, we demonstrate how volcanoes can be used to directly predict an experimental observable, the turnover frequency. Discussion is also provided on how different flavors of molecular volcanoes can be used to analyze aspects of homogeneous catalysis of interest to experimentalists, such as determining the product selectivity and probing the substrate scope.The third section focuses on incorporating machine learning approaches into molecular volcanoes and invoking big-data-type approaches in the analysis of catalytic behavior. Specifically, we illustrate how machine learning can be used to predict the value of the descriptor variable, which facilitates nearly instantaneous screening of thousands of catalysts. With the large amount of data created from the machine learning/volcano plot tandem, we show how the resulting database can be mined to garner an enhanced understanding of catalytic processes. Emphasis is also placed on the latest generation of augmented volcano plots, which differ fundamentally from earlier volcanoes by elimination of the use of linear free energy scaling relationships and by assessment of the similarity of the complete catalytic cycle energy profile to that for an ideal reference species that is used to discriminate catalytic performance.We conclude by examining a handful of applications of molecular volcano plots to interesting problems in homogeneous catalysis and offering thoughts on the future prospects and uses of this new set of tools.
综述
在过去的二十年里,线性自由能标度关系和火山图作为计算工具被频繁使用,有助于理解和预测多相催化剂和电催化剂的催化行为。基于萨巴蒂尔原理,即催化剂与底物的结合既不能太强也不能太弱,火山图通过描述符变量来估计催化性能(如过电位、催化循环热力学/动力学等)。通过使用线性自由能标度关系,该描述符的值被用来估计其他催化循环中间体/过渡态的相对能量。对这些关系进行后处理会得到一条火山曲线,揭示每种催化剂的预期性能,最佳物种出现在峰值或平台附近。虽然火山图的起源无疑源于对多相催化反应的研究,但直到最近这个概念才被应用到均相催化领域。本综述总结了我们团队在实施和完善“分子火山图”以分析和预测均相催化剂行为方面所做的工作。
我们首先带领读者回顾最初的原理验证研究,该研究通过考察铃木 - 宫浦交叉偶联反应的热力学方面,将该模型从多相催化转移到均相催化。通过建立线性自由能标度关系并重现火山形状,我们明确表明火山图对均相体系也有效。基于这一关键发现,我们进一步说明了如何使用三维分子火山图创建碳 - 碳交叉偶联热力学的统一图景。
第二部分重点介绍了从“热力学”火山图到“动力学”火山图的重要转变,即使用描述符变量直接估计过渡态能垒。进一步拓展这个想法,我们展示了火山图如何直接预测一个实验可观测量——周转频率。还讨论了不同类型的分子火山图如何用于分析实验人员感兴趣的均相催化方面,比如确定产物选择性和探索底物范围。
第三部分着重将机器学习方法纳入分子火山图,并在催化行为分析中采用大数据类型的方法。具体而言,我们说明了机器学习如何用于预测描述符变量的值,这有助于几乎瞬间筛选数千种催化剂。通过机器学习/火山图串联产生的大量数据,我们展示了如何挖掘由此产生的数据库以加深对催化过程的理解。还强调了最新一代的增强型火山图,它与早期火山图有根本区别,不再使用线性自由能标度关系,而是通过评估完整催化循环能量分布与用于区分催化性能的理想参考物种的能量分布的相似性。
我们通过考察分子火山图在均相催化中一些有趣问题的应用,并对这套新工具的未来前景和用途提出思考来结束本文。