Gujar Nidhi, V Nikte Siddhanta, Joshi Rakesh S, Joshi Manali
Bioinformatics Centre, Savitribai Phule Pune University, Ganeshkhind, Pune, 411007, Maharashtra, India.
Physical Chemistry Division, CSIR-National Chemical Laboratory, Dr. Homi Bhabha Road, Pune, Maharashtra, 411008, India.
J Membr Biol. 2021 Jun;254(3):311-319. doi: 10.1007/s00232-021-00172-3. Epub 2021 Feb 11.
Helicoverpa armigera is a devastating polyphagous and cosmopolitan crop pest. There are reports of this insect being resistant to a variety of pesticides raising concern worldwide. The Octopamine (OA) binding β-like receptor (OAR), a GPCR, is widely distributed in the nervous system of the insect and plays essential roles in the physiology and development and thus is an important target for insecticides. Yet, the molecular characterization of the H. armigera OAR (HarmOAR) and rational design of compounds based on this receptor is lacking. As a first step, we performed multiple sequence alignment of all insect OARs, which revealed that the sequences contained all conserved class A GPCR motifs. Phylogenetic studies showed clade-specific variations in the protein sequences primarily arising owing to differences in the ICL3 loop region. Further, a structural model of HarmOAR was built using the inactive human βAR as a template. 0.9 µs atomistic simulations revealed conserved inter helical contacts and water molecules of HarmOAR. The detailed binding of octopamine was studied using molecular docking and 0.3 µs atomistic simulations. Twenty-two insecticides active against octopamine receptors of other insects were compiled and docked to HarmOAR followed by rescoring with binding free energies to prioritize them for H. armigera. Our study suggests α-terpineol to be a good candidate as an insecticide or insect repellent for Helicoverpa armigera.
棉铃虫是一种极具破坏力的多食性世界性作物害虫。有报道称这种昆虫对多种杀虫剂产生了抗性,这引起了全球的关注。章鱼胺(OA)结合β样受体(OAR)是一种G蛋白偶联受体(GPCR),广泛分布于昆虫的神经系统中,在昆虫的生理和发育过程中发挥着重要作用,因此是杀虫剂的一个重要靶点。然而,目前缺乏对棉铃虫OAR(HarmOAR)的分子特征描述以及基于该受体的化合物的合理设计。作为第一步,我们对所有昆虫的OAR进行了多序列比对,结果显示这些序列包含了所有保守的A类GPCR基序。系统发育研究表明,蛋白质序列中的进化枝特异性变异主要是由于ICL3环区域的差异引起的。此外,以无活性的人β肾上腺素能受体(βAR)为模板构建了HarmOAR的结构模型。0.9微秒的原子模拟揭示了HarmOAR保守的螺旋间接触和水分子。使用分子对接和0.3微秒的原子模拟研究了章鱼胺的详细结合情况。收集了22种对其他昆虫的章鱼胺受体有活性的杀虫剂,并将其与HarmOAR进行对接,然后用结合自由能重新评分,以便为棉铃虫确定优先次序。我们的研究表明,α-松油醇是棉铃虫杀虫剂或驱虫剂的良好候选物。