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YTHDF2 的 SUMOylation 通过增加其与 m6A 修饰的 mRNA 的结合亲和力来促进 mRNA 降解和癌症进展。

SUMOylation of YTHDF2 promotes mRNA degradation and cancer progression by increasing its binding affinity with m6A-modified mRNAs.

机构信息

State Key Laboratory of Oncogenes and Related Genes, Department of Biochemistry and Molecular Cell Biology & Shanghai Key Laboratory of Tumor Microenvironment and Inflammation, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China.

Department of Oncology, Shanghai 9th People's Hospital, Shanghai Jiao Tong University School of Medicine, 280 Mohe Road, Shanghai 201999, China.

出版信息

Nucleic Acids Res. 2021 Mar 18;49(5):2859-2877. doi: 10.1093/nar/gkab065.

Abstract

N 6-Methyladenosine (m6A) is the most abundant modification within diverse RNAs including mRNAs and lncRNAs and is regulated by a reversible process with important biological functions. Human YTH domain family 2 (YTHDF2) selectively recognized m6A-RNAs to regulate degradation. However, the possible regulation of YTHDF2 by protein post-translational modification remains unknown. Here, we show that YTHDF2 is SUMOylated in vivo and in vitro at the major site of K571, which can be induced by hypoxia while reduced by oxidative stress and SUMOylation inhibitors. SUMOylation of YTHDF2 has little impact on its ubiquitination and localization, but significantly increases its binding affinity of m6A-modified mRNAs and subsequently results in deregulated gene expressions which accounts for cancer progression. Moreover, Disease-free survival analysis of patients with lung adenocarcinoma derived from TCGA dataset reveals that higher expression of YTHDF2 together with higher expression of SUMO1 predicts poor prognosis. Our works uncover a new regulatory mechanism for YTHDF2 recognition of m6A-RNAs and highlight the importance of YTHDF2 SUMOylation in post-transcriptional gene expression regulation and cancer progression.

摘要

N6-甲基腺苷(m6A)是包括 mRNA 和 lncRNA 在内的各种 RNA 中最丰富的修饰物,其修饰过程受到一种具有重要生物学功能的可逆调控。人类 YTH 结构域家族 2(YTHDF2)可选择性识别 m6A-RNA 以调节其降解。然而,蛋白质翻译后修饰对 YTHDF2 的可能调控作用仍不清楚。本研究显示 YTHDF2 在体内和体外均可在 K571 主要位点发生 SUMO 化修饰,该修饰可被低氧诱导,而被氧化应激和 SUMO 化抑制剂所抑制。YTHDF2 的 SUMO 化修饰对其泛素化和定位几乎没有影响,但显著增加了其对 m6A 修饰 mRNA 的结合亲和力,进而导致基因表达失调,从而促进癌症进展。此外,从 TCGA 数据集中获得的肺腺癌患者的无病生存分析表明,YTHDF2 表达水平升高且 SUMO1 表达水平升高预示着预后不良。本研究揭示了 YTHDF2 识别 m6A-RNA 的新调控机制,并强调了 YTHDF2 SUMO 化在转录后基因表达调控和癌症进展中的重要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/797c/7969013/dba32dd048d0/gkab065fig1.jpg

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