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基于分子标记物——裂殖子表面蛋白-2(msp-2)基因,对来自埃塞俄比亚东北部梅尔卡-韦雷尔的疟原虫分离株的遗传多态性进行研究。

Genetic polymorphisms of Plasmodium falciparum isolates from Melka-Werer, North East Ethiopia based on the merozoite surface protein-2 (msp-2) gene as a molecular marker.

机构信息

Malaria, Neglected Tropical Diseases Research Team, Bacterial, Parasitic, Zoonotic Diseases Research Directorate, Ethiopian Public Health Institute, Addis Ababa, Ethiopia.

Global Health Division, Menzies School of Health Research, Charles Darwin University, Darwin, Australia.

出版信息

Malar J. 2021 Feb 12;20(1):85. doi: 10.1186/s12936-021-03625-1.

DOI:10.1186/s12936-021-03625-1
PMID:33579293
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7881608/
Abstract

BACKGROUND

The characterization of parasite populations circulating in malaria endemic areas is necessary to evaluate the success of ongoing interventions and malaria control strategies. This study was designed to investigate the genetic diversity of Plasmodium falciparum isolates from the semi-arid area in North East Ethiopia, using the highly polymorphic merozoite surface protein-2 (msp2) gene as a molecular marker.

METHODS

Dried blood spot isolates were collected from patients with P. falciparum infection between September 2014 and January 2015 from Melka-Werer, North East Ethiopia. Parasite DNA was extracted and genotyped using allele-specific nested polymerase chain reactions for msp2.

RESULTS

52 isolates were collected with msp2 identified in 41 (78.8%) isolates. Allele typing of the msp2 gene detected the 3D7/IC allelic family in 54% and FC27 allelic family in 46%. A total of 14 different msp2 genotypes were detected including 6 belonging to the 3D7/IC family and 8 to the FC27 family. Forty percent of isolates had multiple genotypes and the overall mean multiplicity of infections (MOI) was 1.2 (95%CI 0.96-1.42). The heterozygosity index was 0.50 for the msp2 locus. There was no difference in MOI between age groups. A negative correlation between parasite density and multiplicity of infection was found (p = 0.02).

CONCLUSION

Plasmodium falciparum isolates from the semi-arid area of North East Ethiopia are mainly monoclonal with low MOI and limited genetic diversity in the study population.

摘要

背景

为了评估正在进行的干预措施和疟疾控制策略的效果,有必要对流行地区循环寄生虫种群进行特征描述。本研究旨在使用高度多态的裂殖子表面蛋白-2(msp2)基因作为分子标记,调查东北埃塞俄比亚半干旱地区疟原虫分离株的遗传多样性。

方法

2014 年 9 月至 2015 年 1 月,从东北埃塞俄比亚的梅尔卡-韦雷尔收集了患有恶性疟原虫感染的患者的干血斑分离物。使用等位基因特异性嵌套聚合酶链反应对 msp2 进行寄生虫 DNA 提取和基因分型。

结果

共收集了 52 个 msp2 阳性分离物。msp2 基因的等位基因分型检测到 54%的 3D7/IC 等位基因家族和 46%的 FC27 等位基因家族。共检测到 14 种不同的 msp2 基因型,其中 6 种属于 3D7/IC 家族,8 种属于 FC27 家族。40%的分离物具有多种基因型,总感染倍数(MOI)平均值为 1.2(95%CI 0.96-1.42)。msp2 基因座的杂合度指数为 0.50。年龄组之间的 MOI 没有差异。发现寄生虫密度与感染倍数之间存在负相关(p=0.02)。

结论

来自东北埃塞俄比亚半干旱地区的恶性疟原虫分离株主要是单克隆的,具有低 MOI 和有限的遗传多样性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/40d4/7881608/f8a3d77c22ca/12936_2021_3625_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/40d4/7881608/d79a0acd65a2/12936_2021_3625_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/40d4/7881608/f8a3d77c22ca/12936_2021_3625_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/40d4/7881608/d79a0acd65a2/12936_2021_3625_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/40d4/7881608/f8a3d77c22ca/12936_2021_3625_Fig2_HTML.jpg

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