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基因表达条码值揭示了帕金森病和胃癌之间的潜在联系。

Gene expression barcode values reveal a potential link between Parkinson's disease and gastric cancer.

机构信息

Division of Clinical Research, First Hospital of Jilin University, Changchun 130021, Jilin, P.R. China.

Center for Applied Statistical Research, School of Mathematics, Jilin University, Changchun 130012, Jilin, P.R. China.

出版信息

Aging (Albany NY). 2021 Feb 16;13(4):6171-6181. doi: 10.18632/aging.202623.

Abstract

Gastric cancer is a disease that develops from the lining of the stomach, whereas Parkinson's disease is a long-term degenerative disorder of the central nervous system that mainly affects the motor system. Although these two diseases seem to be distinct from each other, increasing evidence suggests that they might be linked. To explore the linkage between these two diseases, differentially expressed genes between the diseased people and their normal controls were identified using the barcode algorithm. This algorithm transforms actual gene expression values into barcode values comprised of 1's (expressed genes) and 0's (silenced genes). Once the overlapped differentially expressed genes were identified, their biological relevance was investigated. Thus, using the gene expression profiles and bioinformatics methods, we demonstrate that Parkinson's disease and gastric cancer are indeed linked. This research may serve as a pilot study, and it will stimulate more research to investigate the relationship between gastric cancer and Parkinson's disease from the perspective of gene profiles and their functions.

摘要

胃癌是一种起源于胃黏膜的疾病,而帕金森病是一种长期的中枢神经系统退行性疾病,主要影响运动系统。尽管这两种疾病似乎彼此不同,但越来越多的证据表明它们可能有关联。为了探索这两种疾病之间的联系,使用条形码算法鉴定了患病者和正常对照者之间的差异表达基因。该算法将实际的基因表达值转换为由 1(表达基因)和 0(沉默基因)组成的条形码值。一旦确定了重叠的差异表达基因,就研究它们的生物学相关性。因此,我们使用基因表达谱和生物信息学方法证明了帕金森病和胃癌确实有关联。这项研究可以作为一项初步研究,它将激励更多的研究从基因谱及其功能的角度来研究胃癌和帕金森病之间的关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/677b/7950232/5a86a922e8ec/aging-13-202623-g001.jpg

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