College of Life Sciences, Hunan Normal University, Changsha, 410081, Hunan, China.
Shanghai Institute of Biological Products, Shanghai, 200052, China.
Virol J. 2021 Feb 18;18(1):39. doi: 10.1186/s12985-021-01512-4.
Both the highly pathogenic avian influenza (HPAI) H5N1 and low pathogenic avian influenza (LPAI) H9N2 viruses have been reported to cross species barriers to infect humans. H5N1 viruses can cause severe damage and are associated with a high mortality rate, but H9N2 viruses do not cause such outcomes. Our purpose was to use proteomics technology to study the differential expression of mitochondrial-related proteins related to H5N1 and H9N2 virus infections.
According to the determined viral infection titer, A549 cells were infected with 1 multiplicity of infection virus, and the mitochondria were extracted after 24 h of incubation. The protein from lysed mitochondria was analyzed by the BCA method to determine the protein concentration, as well as SDS-PAGE (preliminary analysis), two-dimensional gel electrophoresis, and mass spectrometry. Differential protein spots were selected, and Western blotting was performed to verify the proteomics results. The identified proteins were subjected to GO analysis for subcellular localization, KEGG analysis for functional classification and signaling pathways assessment, and STRING analysis for functional protein association network construction.
In the 2-D gel electrophoresis analysis, 227 protein spots were detected in the H5N1-infected group, and 169 protein spots were detected in the H9N2-infected group. Protein spots were further subjected to mass spectrometry identification and removal of redundancy, and 32 differentially expressed proteins were identified. Compared with the H9N2 group, the H5N1-infected group had 16 upregulated mitochondrial proteins and 16 downregulated proteins. The differential expression of 70-kDa heat shock protein analogs, short-chain enoyl-CoA hydratase, malate dehydrogenase, and ATP synthase was verified by Western blot, and the results were consistent with the proteomics findings. Functional analysis indicated that these differentially expressed proteins were primarily involved in apoptosis and metabolism.
Compared with their expression in the H9N2 group, the differential expression of eight mitochondrial proteins in the H5N1 group led to host T cell activation, antigen presentation, stress response, ATP synthesis and cell apoptosis reduction, leading to higher pathogenicity of H5N1 than H9N2.
高致病性禽流感(HPAI)H5N1 和低致病性禽流感(LPAI)H9N2 病毒都已被报道能够跨越物种屏障感染人类。H5N1 病毒可导致严重损害,且与高死亡率相关,但 H9N2 病毒不会导致此类结果。我们的目的是使用蛋白质组学技术研究与 H5N1 和 H9N2 病毒感染相关的线粒体相关蛋白的差异表达。
根据确定的病毒感染滴度,用 1 感染复数的病毒感染 A549 细胞,孵育 24 小时后提取线粒体。用 BCA 法分析裂解线粒体的蛋白质,以确定蛋白质浓度,以及 SDS-PAGE(初步分析)、二维凝胶电泳和质谱。选择差异蛋白点,进行 Western blot 验证蛋白质组学结果。对鉴定的蛋白进行 GO 分析以确定亚细胞定位,KEGG 分析以确定功能分类和信号通路评估,STRING 分析以构建功能蛋白关联网络。
在 2-D 凝胶电泳分析中,H5N1 感染组检测到 227 个蛋白点,H9N2 感染组检测到 169 个蛋白点。进一步对蛋白点进行质谱鉴定和冗余去除,鉴定出 32 个差异表达蛋白。与 H9N2 组相比,H5N1 感染组有 16 个上调的线粒体蛋白和 16 个下调的蛋白。通过 Western blot 验证了 70kDa 热休克蛋白类似物、短链烯酰辅酶 A 水合酶、苹果酸脱氢酶和 ATP 合酶的差异表达,结果与蛋白质组学结果一致。功能分析表明,这些差异表达蛋白主要参与细胞凋亡和代谢。
与 H9N2 组相比,H5N1 组 8 种线粒体蛋白的差异表达导致宿主 T 细胞激活、抗原呈递、应激反应、ATP 合成和细胞凋亡减少,从而导致 H5N1 比 H9N2 具有更高的致病性。