MitoFlex：一种用于动物线粒体基因组组装、注释和可视化的高效、高性能工具包。
MitoFlex: an efficient, high-performance toolkit for animal mitogenome assembly, annotation and visualization.
作者信息
Li Jun-Yu, Li Wei-Xuan, Wang An-Tai, Zhang Yu
机构信息
Shenzhen Key Laboratory of Marine Bioresource and Eco-environmental Science, Guangdong Engineering Research Center for Marine Algal Biotechnology, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen 518060, PR China.
出版信息
Bioinformatics. 2021 Sep 29;37(18):3001-3003. doi: 10.1093/bioinformatics/btab111.
SUMMARY
MitoFlex is a linux-based mitochondrial genome analysis toolkit, which provides a complete workflow of raw data filtering, de novo assembly, mitochondrial genome identification and annotation for animal High Throughput Sequencing data. The overall performance was compared between MitoFlex and its analogue MitoZ, in terms of protein-coding gene recovery, memory consumption and processing speed.
AVAILABILITYAND IMPLEMENTATION
MitoFlex is available at https://github.com/Prunoideae/MitoFlex under GPLv3 license.
SUPPLEMENTARY INFORMATION
Supplementary data are available at Bioinformatics online.
摘要
MitoFlex是一个基于Linux的线粒体基因组分析工具包，它为动物高通量测序数据提供了一个完整的原始数据过滤、从头组装、线粒体基因组识别和注释的工作流程。在蛋白质编码基因恢复、内存消耗和处理速度方面，对MitoFlex及其类似物MitoZ的整体性能进行了比较。
可用性和实现方式
MitoFlex可在https://github.com/Prunoideae/MitoFlex上获得，遵循GPLv3许可协议。
补充信息
补充数据可在《生物信息学》在线获取。
Zotero 插件