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肠球菌噬菌体 F170/08 的 Lys170 四聚体细胞结合域的结构和生化分析。

Structural and biochemical analyses of the tetrameric cell binding domain of Lys170 from enterococcal phage F170/08.

机构信息

The Key Laboratory of Innate Immune Biology of Fujian Province, Provincial University Key Laboratory of Cellular Stress Response and Metabolic Regulation, Biomedical Research Center of South China, Key Laboratory of OptoElectronic Science and Technology for Medicine of the Ministry of Education, College of Life Sciences, Fujian Normal University, Fuzhou, China.

The Engineering Technology Research Center of Characteristic Medicinal Plants of Fujian, Ningde Normal University, Ningde, China.

出版信息

Eur Biophys J. 2021 Jul;50(5):721-729. doi: 10.1007/s00249-021-01511-x. Epub 2021 Feb 20.

Abstract

Lysins are a class of hydrolytic enzymes used by bacteriophages to target and cleave the peptidoglycan of bacterial cell walls during their lytic cycle. The lysins from bacteriophages that infect Gram-positive bacteria are typically monomeric and consist of one or two catalytic domains (CD) and a cell binding domain (CBD). However, multimeric lysins encoded by a single gene have also been reported, among which Lys170 from enterococcal phage F170/08 was one of the first identified. Here, we determined the crystal structure of Lys170 CBD at 1.40 Å resolution. The structure reveals that Lys170 CBDs assemble into a tetrameric functional unit and that each monomer folds into a three-stranded β-sheet core capped on each side by an α-helix. In addition, we identified key residues of Lys170 CBD involved in host cell binding. Our work provides a basis for designing highly efficient lysins targeting Enterococcus faecalis.

摘要

溶菌酶是一类水解酶,噬菌体在裂解周期中利用它来靶向并切割细菌细胞壁的肽聚糖。感染革兰氏阳性细菌的噬菌体的溶菌酶通常是单体的,由一个或两个催化结构域(CD)和一个细胞结合结构域(CBD)组成。然而,也有报道称,由单个基因编码的多聚体溶菌酶,其中肠球菌噬菌体 F170/08 的 Lys170 是最早被鉴定的之一。在这里,我们确定了 Lys170 CBD 的晶体结构,分辨率为 1.40Å。该结构表明,Lys170 CBD 组装成一个四聚体功能单元,每个单体折叠成一个三链β-sheet 核心,两侧由一个α-螺旋封顶。此外,我们确定了 Lys170 CBD 中参与宿主细胞结合的关键残基。我们的工作为设计针对粪肠球菌的高效溶菌酶提供了基础。

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