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(鲈形目:裸颊鲷科)线粒体全基因组的特征分析与系统发育分析

Characterization and phylogenetic analysis of the complete mitochondrial genome of (Perciformes: Terapontidae).

作者信息

Zeng Lei, Chen Pimao, Yu Jie, Chen Guobao

机构信息

South China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Guangzhou, China.

Guangdong Provincial Key Laboratory of Fishery Ecology and Environment, Guangzhou, China.

出版信息

Mitochondrial DNA B Resour. 2021 Feb 11;6(2):508-509. doi: 10.1080/23802359.2021.1872438.

DOI:10.1080/23802359.2021.1872438
PMID:33628906
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7889202/
Abstract

We assembled the complete mitochondrial genome of based on high-throughput Illumina sequencing. The mitochondrial genome of is 16,587 bp in length, containing 13 protein-coding genes (PCGs), 22 tRNAs, two rRNAs, and one putative control region (CR), and its overall nucleotides base composition is 27.4% A, 25.7% T, 16.9% G, and 29.9% C. Bayesian Inference revealed that all species of Terapontidae formed into one group, while the other nine species within Perciformes clustered into the other group. and were the closest relatives. These results should help to better understand the phylogenetic interrelationships of Terapontidae.

摘要

我们基于高通量Illumina测序组装了[物种名称]的完整线粒体基因组。[物种名称]的线粒体基因组长度为16,587 bp,包含13个蛋白质编码基因(PCGs)、22个tRNA、两个rRNA和一个假定的控制区(CR),其总体核苷酸碱基组成为27.4%A、25.7%T、16.9%G和29.9%C。贝叶斯推断显示,丽鲷科的所有物种形成一个组,而鲈形目内的其他九个物种聚为另一组。[两个物种名称]是最近的亲属。这些结果应有助于更好地理解丽鲷科的系统发育相互关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7068/7889202/d691c8163b5e/TMDN_A_1872438_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7068/7889202/d691c8163b5e/TMDN_A_1872438_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7068/7889202/d691c8163b5e/TMDN_A_1872438_F0001_C.jpg

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本文引用的文献

1
Characterization of the complete mitochondrial genome of (Teleost: Balitoridae) and its phylogenetic analysis.(硬骨鱼纲:平鳍鳅科)线粒体全基因组特征及其系统发育分析
Mitochondrial DNA B Resour. 2020 Jun 4;5(3):2308-2309. doi: 10.1080/23802359.2020.1773342.
2
MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space.MrBayes 3.2:在大型模型空间中进行高效的贝叶斯系统发育推断和模型选择。
Syst Biol. 2012 May;61(3):539-42. doi: 10.1093/sysbio/sys029. Epub 2012 Feb 22.
3
Animal mitochondrial genomes.
动物线粒体基因组。
Nucleic Acids Res. 1999 Apr 15;27(8):1767-80. doi: 10.1093/nar/27.8.1767.