在韩国分离的（L.）Merr.（禾本科）的完整叶绿体基因组：叶绿体基因组种内变异研究
The complete chloroplast genome of (L.) Merr. isolated in Korea (Poaceae): investigation of intraspecific variations on chloroplast genomes.
作者信息
Lee Bumkyu, Park Jongsun
机构信息
Department of Environmental Science & Biotechnology, Medicical Science, Jeonju University, Jeonju, Republic of Korea.
InfoBoss Inc., Seoul, Republic of Korea.
出版信息
Mitochondrial DNA B Resour. 2021 Feb 12;6(2):572-574. doi: 10.1080/23802359.2021.1875907.
Completed chloroplast genome of (L.) Merr. isolated in Korea is 135,888 bp long (GC ratio is 38.4%) and has four subregions: 81,370 bp of large single copy (36.3%) and 12,594 bp of small single copy (32.7%) regions are separated by 20,962 bp of inverted repeat (44.1%) regions including 130 genes (83 protein-coding genes, eight rRNAs, 38 tRNAs, and one pseudogene). 28 SNPs and 57 INDELs were identified ss intraspecific variations against previously sequenced chloroplast genome. Phylogenetic trees show that and (=) are clustered in one clade with low level of variations on chloroplast genomes.
在韩国分离得到的（L.）Merr. 的完整叶绿体基因组长度为135,888 bp（GC含量为38.4%），有四个亚区域：81,370 bp的大单拷贝区（36.3%）和12,594 bp的小单拷贝区（32.7%）被20,962 bp的反向重复区（44.1%）隔开，反向重复区包含130个基因（83个蛋白质编码基因、8个rRNA、38个tRNA和1个假基因）。与之前测序的叶绿体基因组相比，鉴定出28个单核苷酸多态性（SNP）和57个插入缺失（INDEL）作为种内变异。系统发育树显示，（物种名称）和（物种名称）（=）聚集在一个分支中，叶绿体基因组上的变异水平较低。
Zotero 插件