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海洋沉积物中分离到的鲸居芽胞杆菌新种。

Tenacibaculum pelagium sp. nov., isolated from marine sediment.

机构信息

Marine College, Shandong University, Weihai, 264209, Shandong, People's Republic of China.

State Key Laboratory of Microbial Technology, Shandong University, Qingdao, 266237, Shandong, People's Republic of China.

出版信息

Arch Microbiol. 2021 Jul;203(5):2229-2236. doi: 10.1007/s00203-021-02208-7. Epub 2021 Feb 25.

Abstract

A novel bright yellow pigmented, Gram-stain-negative, gliding, aerobic and rod-shaped marine bacterium, designated strain S7007, was isolated from a marine sediment sample taken from Jingzi Wharf, Weihai, China. The bacterium was able to grow at 4-33 °C (optimum 28 °C), at pH 6.5-9.0 (optimum 7.0) and with 2.0-4.0% (w/v) NaCl (optimum 3.0%). According to the phylogenetic analysis based on the 16S rRNA gene sequences, strain S7007 was associated with the genus Tenacibaculum and showed highest similarity to Tenacibaculum adriaticum JCM 14633 (98.0%). The average nucleotide identity (ANI) scores of strain S7007 with T. adriaticum JCM 14633 and T. maritimum NBRC 110778 were 78.3% and 77.1%, respectively and the Genome-to-Genome Distance Calculator (dDDH) scores were 20.5% and 19.9%, respectively. The sole isoprenoid quinone was MK-6 and the major cellular fatty acids (> 10.0%) were iso-C, iso-C 3-OH, iso-C G and summed feature 3 (comprising C ω7c and/or C ω6c). The major polar lipids of strain S7007 were phosphatidylethanolamine, phosphatidyldimethylethanolamine, one unidentified lipid and two unidentified aminolipids. The genomic DNA G + C content was 30.9 mol %. The combined phenotypic data and phylogenetic inference that strain S7007 should be classified as a novel species in the genus Tenacibaculum, for which the name Tenacibaculum pelagium sp. nov. is proposed. The type strain is S7007 (= MCCC 1H00428 = KCTC 72941).

摘要

一株新型亮黄色、革兰氏阴性、滑行、需氧、杆状海洋细菌,被命名为 S7007 菌株,从中国威海荆子码头的海洋沉积物样本中分离得到。该细菌能够在 4-33°C(最适 28°C)、pH 值 6.5-9.0(最适 7.0)和 2.0-4.0%(w/v)NaCl(最适 3.0%)的条件下生长。根据 16S rRNA 基因序列的系统发育分析,菌株 S7007 与 Tenacibaculum 属密切相关,与 Tenacibaculum adriaticum JCM 14633 的相似度最高(98.0%)。与 T. adriaticum JCM 14633 和 T. maritimum NBRC 110778 的平均核苷酸同一性(ANI)评分分别为 78.3%和 77.1%,基因组到基因组距离计算器(dDDH)评分分别为 20.5%和 19.9%。唯一的异戊烯醌是 MK-6,主要的细胞脂肪酸(>10.0%)是 iso-C、iso-C 3-OH、iso-C G 和总和特征 3(包含 C ω7c 和/或 C ω6c)。菌株 S7007 的主要极性脂质是磷脂酰乙醇胺、磷脂酰二甲乙醇胺、一种未鉴定的脂质和两种未鉴定的氨基脂质。基因组 DNA G+C 含量为 30.9 mol%。综合表型数据和系统发育推断,菌株 S7007 应归类为 Tenacibaculum 属的一个新种,命名为 Tenacibaculum pelagium sp. nov.。模式菌株为 S7007(=MCCC 1H00428=KCTC 72941)。

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