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从一例致命败血症病例中分离出的携带[具体信息缺失]的侵袭性肠炎沙门氏菌坎施塔特血清型的基因组序列草图

Draft Genome Sequence of Invasive Salmonella enterica Serovar Cannstatt Harboring ., Isolated from a Fatal Sepsis Case.

作者信息

Paveenkittiporn Wantana, Kamjumphol Watcharaporn, Kerdsin Anusak

机构信息

National Institute of Health, Department of Medical Sciences, Ministry of Public Health, Nonthaburi, Thailand

National Institute of Health, Department of Medical Sciences, Ministry of Public Health, Nonthaburi, Thailand.

出版信息

Microbiol Resour Announc. 2021 Feb 25;10(8):e01270-20. doi: 10.1128/MRA.01270-20.

DOI:10.1128/MRA.01270-20
PMID:33632863
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7909088/
Abstract

Here, we report the whole-genome sequence of multidrug-resistant serovar Cannstatt harboring , isolated from a fatal sepsis case. Genomic analysis revealed that the isolate was sequence type 2390 carrying , , , , , , , , and Three Inc plasmids were observed, including the IncX4 plasmid containing .

摘要

在此，我们报告了从一例致命败血症病例中分离出的携带多重耐药血清型坎施塔特菌的全基因组序列。基因组分析表明，该分离株为序列型2390，携带……、……、……、……、……、……、……、……和……。观察到三种Inc质粒，包括含有……的IncX4质粒。

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本文引用的文献

1
Occurrence and Characteristics of Mobile Colistin Resistance () Gene-Containing Isolates from the Environment: A Review.环境中携带黏菌素耐药基因的分离株的发生和特征：综述。
Int J Environ Res Public Health. 2020 Feb 6;17(3):1028. doi: 10.3390/ijerph17031028.
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CARD 2020: antibiotic resistome surveillance with the comprehensive antibiotic resistance database.CARD 2020：利用综合抗生素耐药数据库进行抗生素耐药组监测。
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Salmonella enterica.肠炎沙门氏菌
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A genomic overview of the population structure of Salmonella.沙门氏菌群体结构的基因组概述。
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Antonie Van Leeuwenhoek. 2017 Oct;110(10):1281-1286. doi: 10.1007/s10482-017-0844-4. Epub 2017 Feb 15.
6
The Salmonella In Silico Typing Resource (SISTR): An Open Web-Accessible Tool for Rapidly Typing and Subtyping Draft Salmonella Genome Assemblies.沙门氏菌电子分型资源（SISTR）：一种可通过网络公开访问的工具，用于快速对沙门氏菌基因组草图进行分型和亚型分析。
PLoS One. 2016 Jan 22;11(1):e0147101. doi: 10.1371/journal.pone.0147101. eCollection 2016.
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In silico detection and typing of plasmids using PlasmidFinder and plasmid multilocus sequence typing.使用质粒查找工具（PlasmidFinder）和质粒多位点序列分型进行质粒的电子检测和分型
Antimicrob Agents Chemother. 2014 Jul;58(7):3895-903. doi: 10.1128/AAC.02412-14. Epub 2014 Apr 28.
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Kraken: ultrafast metagenomic sequence classification using exact alignments.克拉肯：使用精确比对的超快速宏基因组序列分类
Genome Biol. 2014 Mar 3;15(3):R46. doi: 10.1186/gb-2014-15-3-r46.
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Identification of acquired antimicrobial resistance genes.获得性抗菌耐药基因的鉴定。
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