Narendran Amithi, Vangaveti Sweta, Ranganathan Srivathsan V, Eruysal Emily, Craft Miranda, Alrifai Omar, Chua Fu Yee, Sarachan Kathryn, Litwa Breann, Ramachandran Sheetal, Agris Paul F
The RNA Institute and Department of Biological Sciences, University of Albany, Albany, NY, United States.
Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, MA, United States.
Front Mol Biosci. 2021 Feb 9;7:584228. doi: 10.3389/fmolb.2020.584228. eCollection 2020.
Human Genome Wide Association Studies found a significant risk of Type 2 Diabetes Mellitus (T2DM) in single nucleotide polymorphisms in the gene. The gene is remote from the insulin gene and with the surprising function of a specific tRNA modification. Population studies and case control studies acquired evidences of the connection between Cdkal1 protein and insulin production over the years. To obtain biochemical proofs directly linking potential SNPs to their roles in insulin production and availability is challenging, but the development of Cdkal1 knock out mice and knock out cell lines made it possible to extend our knowledge towards therapeutic field of diabetic research. Supporting the evidences, here we show that knock down of the gene using small interfering and short hairpin RNA in the NIT-1 cell line, a β-cell line inducible for insulin resulted in reduced levels of and mature insulin mRNAs, increased the level of precursor insulin mRNA, decreased Cdkal1 and insulin proteins, and diminished modification of tRNA from tA to mstA, the specified function of Cdkal1. tRNA lacking ms- is incapable of establishing sufficient hydrogen bonding energy and hydrophobic stabilization to decode the wobble codon AAG.
全基因组关联研究发现,该基因中的单核苷酸多态性存在患2型糖尿病(T2DM)的显著风险。该基因远离胰岛素基因,具有特定tRNA修饰的惊人功能。多年来,人群研究和病例对照研究获得了Cdkal1蛋白与胰岛素产生之间联系的证据。要获得直接将潜在单核苷酸多态性与其在胰岛素产生和可用性方面的作用联系起来的生化证据具有挑战性,但Cdkal1基因敲除小鼠和基因敲除细胞系的发展使我们有可能在糖尿病研究治疗领域扩展知识。为支持这些证据,我们在此表明,在NIT-1细胞系(一种可诱导胰岛素产生的β细胞系)中使用小干扰RNA和短发夹RNA敲低该基因,导致 和成熟胰岛素mRNA水平降低,前体胰岛素mRNA水平升高,Cdkal1和胰岛素蛋白减少,并且tRNA从tA到mstA的修饰减少,这是Cdkal1的特定功能。缺乏ms-的tRNA无法建立足够的氢键能量和疏水稳定性来解码摆动密码子AAG。