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体内 CD8 T 细胞 CRISPR 筛选揭示了 Fli1 在感染和癌症中的控制作用。

In vivo CD8 T cell CRISPR screening reveals control by Fli1 in infection and cancer.

机构信息

Department of Systems Pharmacology and Translational Therapeutics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA; Institute for Immunology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA; Department of Cancer Biology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA; Parker Institute for Cancer Immunotherapy at University of Pennsylvania, Philadelphia, PA, USA.

Department of Cancer Biology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA; Epigenetics Institute, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.

出版信息

Cell. 2021 Mar 4;184(5):1262-1280.e22. doi: 10.1016/j.cell.2021.02.019. Epub 2021 Feb 25.


DOI:10.1016/j.cell.2021.02.019
PMID:33636129
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8054351/
Abstract

Improving effector activity of antigen-specific T cells is a major goal in cancer immunotherapy. Despite the identification of several effector T cell (T)-driving transcription factors (TFs), the transcriptional coordination of T biology remains poorly understood. We developed an in vivo T cell CRISPR screening platform and identified a key mechanism restraining T biology through the ETS family TF, Fli1. Genetic deletion of Fli1 enhanced T responses without compromising memory or exhaustion precursors. Fli1 restrained T lineage differentiation by binding to cis-regulatory elements of effector-associated genes. Loss of Fli1 increased chromatin accessibility at ETS:RUNX motifs, allowing more efficient Runx3-driven T biology. CD8 T cells lacking Fli1 provided substantially better protection against multiple infections and tumors. These data indicate that Fli1 safeguards the developing CD8 T cell transcriptional landscape from excessive ETS:RUNX-driven T cell differentiation. Moreover, genetic deletion of Fli1 improves T differentiation and protective immunity in infections and cancer.

摘要

提高抗原特异性 T 细胞的效应器活性是癌症免疫治疗的主要目标。尽管已经确定了几个效应 T 细胞(T)驱动转录因子(TF),但 T 生物学的转录协调仍知之甚少。我们开发了一种体内 T 细胞 CRISPR 筛选平台,并通过 ETS 家族 TF,Fli1,发现了一种限制 T 生物学的关键机制。Fli1 的基因缺失增强了 T 反应,而不损害记忆或衰竭前体。Fli1 通过与效应相关基因的顺式调节元件结合来抑制 T 谱系分化。Fli1 的缺失增加了 ETS:RUNX 基序处的染色质可及性,从而允许更有效地进行 Runx3 驱动的 T 生物学。缺乏 Fli1 的 CD8 T 细胞对多种感染和肿瘤提供了更好的保护。这些数据表明,Fli1 保护发育中的 CD8 T 细胞转录景观免受过度的 ETS:RUNX 驱动的 T 细胞分化。此外,Fli1 的基因缺失可改善感染和癌症中的 T 细胞分化和保护性免疫。

相似文献

[1]
In vivo CD8 T cell CRISPR screening reveals control by Fli1 in infection and cancer.

Cell. 2021-3-4

[2]
In vivo CRISPR screening reveals nutrient signaling processes underpinning CD8 T cell fate decisions.

Cell. 2021-3-4

[3]
The Transcription Factor Runx3 Establishes Chromatin Accessibility of cis-Regulatory Landscapes that Drive Memory Cytotoxic T Lymphocyte Formation.

Immunity. 2018-4-17

[4]
Developmental Relationships of Four Exhausted CD8 T Cell Subsets Reveals Underlying Transcriptional and Epigenetic Landscape Control Mechanisms.

Immunity. 2020-5-11

[5]
FLI1 promotes IFN-γ-induced kynurenine production to impair anti-tumor immunity.

Nat Commun. 2024-5-30

[6]
Epigenetic signature of PD-1+ TCF1+ CD8 T cells that act as resource cells during chronic viral infection and respond to PD-1 blockade.

Proc Natl Acad Sci U S A. 2019-6-21

[7]
The transcription factor Runx3 guards cytotoxic CD8 effector T cells against deviation towards follicular helper T cell lineage.

Nat Immunol. 2017-8

[8]
Ets factors and a newly identified polymorphism regulate Fli1 promoter activity in lymphocytes.

Mol Immunol. 2008-1

[9]
ERG and FLI1 binding sites demarcate targets for aberrant epigenetic regulation by AML1-ETO in acute myeloid leukemia.

Blood. 2012-9-14

[10]
Morpholino antisense oligonucleotide-mediated gene knockdown during thymocyte development reveals role for Runx3 transcription factor in CD4 silencing during development of CD4-/CD8+ thymocytes.

J Immunol. 2003-10-1

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Nat Immunol. 2025-8-12

[2]
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Trans Am Clin Climatol Assoc. 2025

[3]
Methods and applications of in vivo CRISPR screening.

Nat Rev Genet. 2025-7-29

[4]
LARP4-mediated hypertranslation drives T cell dysfunction in tumors.

Nat Immunol. 2025-7-22

[5]
The costimulatory molecule ICOS limits memory-like properties and function of exhausted PD-1CD8 T cells.

Immunity. 2025-7-1

[6]
Live-cell analyses with unsegmented images to study cancer cell response to modified T cell therapy.

bioRxiv. 2025-6-7

[7]
Intentional heterogeneity in autologous cell-based gene therapies: strategic considerations for first-in-human trials.

J Immunother Cancer. 2025-6-5

[8]
HDAC1 controls the generation and maintenance of effector-like CD8+ T cells during chronic viral infection.

J Exp Med. 2025-8-4

[9]
Enhancer-driven gene regulatory networks reveal transcription factors governing T cell adaptation and differentiation in the tumor microenvironment.

Immunity. 2025-7-8

[10]
Deciphering the role of histone modifications in memory and exhausted CD8 T cells.

Sci Rep. 2025-5-19

本文引用的文献

[1]
CRISPR-engineered T cells in patients with refractory cancer.

Science. 2020-2-6

[2]
Targeting REGNASE-1 programs long-lived effector T cells for cancer therapy.

Nature. 2019-12-11

[3]
CD4 T Cell Help Is Required for the Formation of a Cytolytic CD8 T Cell Subset that Protects against Chronic Infection and Cancer.

Immunity. 2019-12-3

[4]
c-Jun overexpression in CAR T cells induces exhaustion resistance.

Nature. 2019-12-4

[5]
Batf Pioneers the Reorganization of Chromatin in Developing Effector T Cells via Ets1-Dependent Recruitment of Ctcf.

Cell Rep. 2019-10-29

[6]
Hidden Caveat of Inducible Cre Recombinase.

Immunity. 2019-10-15

[7]
Multiplexed activation of endogenous genes by CRISPRa elicits potent antitumor immunity.

Nat Immunol. 2019-10-14

[8]
TCF-1-Centered Transcriptional Network Drives an Effector versus Exhausted CD8 T Cell-Fate Decision.

Immunity. 2019-10-9

[9]
In vivo CRISPR screening in CD8 T cells with AAV-Sleeping Beauty hybrid vectors identifies membrane targets for improving immunotherapy for glioblastoma.

Nat Biotechnol. 2019-9-23

[10]
CRISPR-Edited Stem Cells in a Patient with HIV and Acute Lymphocytic Leukemia.

N Engl J Med. 2019-9-11

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