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从高内涵行为追踪推断胚胎后发育的时间组织。

Inferring temporal organization of postembryonic development from high-content behavioral tracking.

机构信息

Department of Molecular Biosciences, Northwestern University, Evanston, IL, 60208, USA.

Department of Physics, University of Colorado, Boulder, CO, 80309, USA.

出版信息

Dev Biol. 2021 Jul;475:54-64. doi: 10.1016/j.ydbio.2021.02.007. Epub 2021 Feb 24.

Abstract

Understanding temporal regulation of development remains an important challenge. Whereas average, species-typical timing of many developmental processes has been established, less is known about inter-individual variability and correlations in timing of specific events. We addressed these questions in the context of postembryonic development in Caenorhabditis elegans. Based on patterns of locomotor activity of freely moving animals, we inferred durations of four larval stages (L1-L4) in over 100 individuals. Analysis of these data supports several conclusions. Individuals have consistently faster or slower rates of development because durations of L1 through L3 stages are positively correlated. The last larval stage, the L4, is less variable than the earlier stages and its duration is largely independent of the rate of early larval development, implying existence of two distinct larval epochs. We describe characteristic patterns of variation and correlation, as well as the fact that stage durations tend to scale relative to total developmental time. This scaling relationship suggests that each larval stage is not limited by an absolute duration, but is instead terminated when a subset of events that must occur prior to adulthood have been completed. The approach described here offers a scalable platform that will facilitate the study of temporal regulation of postembryonic development.

摘要

了解发育的时间调控仍然是一个重要的挑战。虽然已经确定了许多发育过程的平均、物种典型的时间,但对于特定事件的时间的个体间变异性和相关性知之甚少。我们在秀丽隐杆线虫的胚胎后发育背景下解决了这些问题。基于自由移动动物的运动活性模式,我们推断了 100 多个个体的四个幼虫阶段(L1-L4)的持续时间。对这些数据的分析支持了几个结论。个体的发育速度始终更快或更慢,因为 L1 到 L3 阶段的持续时间呈正相关。最后一个幼虫阶段 L4 比早期阶段变化较小,其持续时间在很大程度上独立于早期幼虫发育的速度,这意味着存在两个不同的幼虫时期。我们描述了变异和相关性的特征模式,以及阶段持续时间往往相对于总发育时间进行缩放的事实。这种缩放关系表明,每个幼虫阶段不受绝对持续时间的限制,而是在完成成年前必须发生的一组事件完成后结束。这里描述的方法提供了一个可扩展的平台,将促进对胚胎后发育的时间调控的研究。

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