普通核桃的完整叶绿体基因组（）。
The complete chloroplast genome of common walnut ().
作者信息
Hu Yiheng, Woeste Keith E, Dang Meng, Zhou Tao, Feng Xiaojia, Zhao Guifang, Liu Zhanlin, Li Zhonghu, Zhao Peng
机构信息
Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi'an, China.
USDA Forest Service Hardwood Tree Improvement and Regeneration Center (HTIRC), Department of Forestry and Natural Resources, Purdue University, West Lafayette, IN, USA.
出版信息
Mitochondrial DNA B Resour. 2016 Mar 24;1(1):189-190. doi: 10.1080/23802359.2015.1137804.
Common walnut ( L.) is cultivated in temperate regions worldwide for its wood and nuts. The complete chloroplast genome of was sequenced using the Illumina MiSeq platform. This is the first complete chloroplast sequence for the Juglandaceae, a family that includes numerous species of economic importance. The chloroplast genome of was 160 367 bp in length, with 36.11% GC content. It contains a pair of inverted repeats (26 035 bp) which were separated by a large single copy (89 872 bp) and a small single copy region (18 425 bp). A total of 137 genes were annotated, which included 86 protein-coding genes, three pseudogenes (two and one ), 40 tRNA genes and eight rRNA genes. The neighbour-joining phylogenetic analysis with the reported chloroplast genomes showed that common walnut chloroplasts are most closely related to those of the Fagaceae family.
普通核桃（Juglans regia L.）在全球温带地区因其木材和坚果而被种植。使用Illumina MiSeq平台对其完整叶绿体基因组进行了测序。这是胡桃科的首个完整叶绿体序列，该科包含许多具有经济重要性的物种。普通核桃的叶绿体基因组长度为160367 bp，GC含量为36.11%。它包含一对反向重复序列（26035 bp），被一个大单拷贝区域（89872 bp）和一个小单拷贝区域（18425 bp）隔开。总共注释了137个基因，其中包括86个蛋白质编码基因、三个假基因（两个ycf15和一个ycf68）、40个tRNA基因和八个rRNA基因。与已报道的叶绿体基因组进行的邻接法系统发育分析表明，普通核桃叶绿体与壳斗科的叶绿体关系最为密切。
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