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[两种种植模式下黄连根际土壤理化性质及细菌群落结构的变化]

[Variation in physicochemical properties and bacterial community structure in rhizosphere soil of Coptis chinensis tow cropping modes].

作者信息

Wang Yu, Pan Yuan, Wu Xiao-Li, Mo Rang-Yu, Tan Jun, Chen Da-Xia

机构信息

Chongqing Sub-center of National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Chongqing Key Laboratory of Chinese Medicine Resources, Institute of Material Medical Planting,Chongqing Academy of Chinese Materia Medica Chongqing 400065, China.

出版信息

Zhongguo Zhong Yao Za Zhi. 2021 Feb;46(3):582-590. doi: 10.19540/j.cnki.cjcmm.20201122.105.

Abstract

The natural forest and artificial shed are the main cropping modes of Coptis chinensis. This study is aimed to reveal the rhizosphere soil bacterial community structure difference between under tow C. chinensis cropping modes-natural forest and artificial shed, and to assist us to completely understand soil quality condition,and provide theoretical guidance for soil improvement and C. chinensis planting. The rhizosphere soil samples of 1-5-year-old C. chinensis under tow cropping modes-natural forest and artificial shed were collected. Illumina high-throughput sequencing technology was used to analyze the alpha diversity, community composition, community structure of soil bacteria under the tow cropping modes,and the effects of soil nutriment indices on soil bacterial community structure. Through the analysis of species number, Shannon, Chao1 index and ACE index of bacterial community, it was found that the bacterial diversity of 1-year-old C. chinensis soil under natural forest cropping mode was significantly lower than that under artificial shed cropping mode, and the diversity of bacterial communities in soil of 2-5-years old C. chinensis were not significant different between two cropping modes. A total of 53 phyla,60 classes,140 orders and 266 families were detected in the rhizosphere soil of C. chinensis under the cropping modes of natural forest, respectively. The rhizosphere soil of C. chinensis under the cropping modes of artificial shed included 54 phyla,65 classes,140 orders and 264 families, respectively. Under the two cropping modes, the top 10 dominant species of bacterial community abundance are the same, they are Proteobacteria, Acidobacteria, Actinobacteria,Bacteroidetes, Planctomycetes, Chloroflexi, Verrucomicrobia, Gemmatimonadetes, Firmicutes and Cyanobacteria, but there are differences in the abundance sequence. The top 10 dominant species of bacterial community abundance accounted for 74.36% to 74.30% of the total bacteria, and 3.15% to 3.92% of the bacteria are unclassified. The results of Metastat analysis showed that the abundance of Gemmatimonadetes in the rhizosphere soil of C. chinensis under the cropping modes the artificial shed was significantly higher than that under the natural forest cropping mode(P<0.05). MRPP analysis of community structure differences showed that under tow cropping modes, there were significant differences in the bacterial community structure of 1-4-year-old soil bacteria, among which the difference between 1-year-old soil samples was the largest. With the increase of cropping years, the difference gradually decreases, and there is no significant difference in the bacterial community structure between 5-year-old soil samples. RDA analysis and correlation analysis of bacterial community structure and soil physical and chemical properties showed that the order of environmental factors on the rhizosphere soil bacteria of Coptis chinensis was: pH>available P> total P> total K>bulk density>total N>available N>organic matter. The results are helpful to understand the soil health of C. chinensis and provide scientific basis and theoretical guidance for soil improvement and C. chinensis planting.

摘要

天然林和人工棚是黄连的主要种植模式。本研究旨在揭示黄连两种种植模式——天然林和人工棚下根际土壤细菌群落结构差异,以帮助我们全面了解土壤质量状况,并为土壤改良和黄连种植提供理论指导。采集了两种种植模式下1 - 5年生黄连的根际土壤样本。采用Illumina高通量测序技术分析两种种植模式下土壤细菌的α多样性、群落组成、群落结构以及土壤养分指标对土壤细菌群落结构的影响。通过对细菌群落的物种数、香农指数、Chao1指数和ACE指数分析发现,天然林种植模式下1年生黄连土壤细菌多样性显著低于人工棚种植模式,2 - 5年生黄连土壤细菌群落多样性在两种种植模式间差异不显著。天然林种植模式下黄连根际土壤共检测到53个门、60个纲、140个目和266个科。人工棚种植模式下黄连根际土壤分别包括54个门、65个纲、140个目和264个科。在两种种植模式下,细菌群落丰度排名前10的优势种相同,分别是变形菌门、酸杆菌门、放线菌门、拟杆菌门、浮霉菌门、绿弯菌门、疣微菌门、芽单胞菌门、厚壁菌门和蓝细菌门,但丰度序列存在差异。细菌群落丰度排名前10的优势种占细菌总数的74.36%至74.30%,未分类细菌占3.15%至3.92%。Metastat分析结果表明,人工棚种植模式下黄连根际土壤中芽单胞菌门的丰度显著高于天然林种植模式(P<0.05)。群落结构差异的MRPP分析表明,在两种种植模式下,1 - 4年生土壤细菌的群落结构存在显著差异,其中1年生土壤样本间差异最大。随着种植年限增加,差异逐渐减小,5年生土壤样本间细菌群落结构无显著差异。细菌群落结构与土壤理化性质的RDA分析和相关性分析表明,影响黄连根际土壤细菌的环境因子顺序为:pH>有效磷>全磷>全钾>容重>全氮>有效氮>有机质。研究结果有助于了解黄连土壤健康状况,为土壤改良和黄连种植提供科学依据和理论指导。

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