Meyer Nancy, Davulcu Omar, Xie Qing, Silveria Mark, Zane Grant M, Large Edward, Chapman Michael S
Department of Biochemistry and Molecular Biology, Oregon Health and Science University, Portland, United States.
Pacific Northwest Cryo-EM Center, OHSU Center for Spatial Systems Biomedicine, Portland, United States.
Bio Protoc. 2020 Feb 5;10(3):e3513. doi: 10.21769/BioProtoc.3513.
Adeno-associated virus (AAV) is a promising gene therapy vector and the biophysical characterization of its interactions with host proteins is a critical foundation for engineering tissue targeting and immune escape. Presented here are protocols for the production of: (a) the outer protein shells (virus-like particles or VLPs) for serotype 2 (AAV-2) and (b) two fragments from the binding ectodomain of AAV's cellular receptor, AAVR. HisPKD1-2 comprises the first two polycystic kidney disease (PKD) domains, the minimal required for efficient binding of AAV, expressed with an N-terminal histidine tag. MBP-PKD1-5 is a fusion of the maltose binding protein with all five of the PKD domains of the AAVR receptor. Presented are the expression and purification of milligram quantities, ample for analyses. For AAV-2, the protocol offers an alternative to the use of (infectious) wild-type virus or transducing vectors. One of the methods for producing transducing vector is in Sf9 cells, and the production of VLPs is based on this. For AAVR, the protocols enable biochemical and biophysical characterization of virus-binding. The minimal two-domain construct allows more saturated binding to symmetry-equivalent sites on the virus, while the larger construct might be better expected to reflect the native receptor.
腺相关病毒(AAV)是一种很有前景的基因治疗载体,其与宿主蛋白相互作用的生物物理特性是构建组织靶向和免疫逃逸的关键基础。本文介绍了以下物质的生产方案:(a)2型(AAV-2)的外蛋白壳(病毒样颗粒或VLPs),以及(b)AAV细胞受体AAVR结合胞外域的两个片段。HisPKD1-2包含前两个多囊肾病(PKD)结构域,这是AAV有效结合所需的最小结构域,带有N端组氨酸标签进行表达。MBP-PKD1-5是麦芽糖结合蛋白与AAVR受体所有五个PKD结构域的融合体。介绍了毫克量的表达和纯化方法,足以进行分析。对于AAV-2,该方案提供了一种替代使用(有感染性的)野生型病毒或转导载体的方法。生产转导载体的一种方法是在Sf9细胞中进行,VLPs的生产基于此。对于AAVR,这些方案能够对病毒结合进行生化和生物物理特性分析。最小的两结构域构建体允许与病毒上对称等效位点更饱和的结合,而较大的构建体可能更有望反映天然受体。