Toubanaki Dimitra K, Karagouni Evdokia
Department of Microbiology, Hellenic Pasteur Institute, Athens, Greece.
Bio Protoc. 2020 Aug 5;10(15):e3711. doi: 10.21769/BioProtoc.3711.
Paper nanobiosensors have been established as an excellent platform for analysis of veterinary and human pathogens causing various diseases. Especially, lateral flow assays or biosensors ideal for sensitive, rapid, robust and accurate analysis in laboratory setups and on-site analysis. Viral RNA detection is of great importance for public health as well as animal health protection. In that aspect, the present protocol focuses on the development of functionalized gold nanoparticle-based lateral flow biosensor for fish nervous necrosis virus (Nodavirus) nucleic acids detection. Total viral RNA, isolated from fish samples was subjected to reverse transcription PCR amplification and the amplification products were mixed with specific oligonucleotide probe. A red test line was formed when nodavirus product was present. The proposed assay has great implications on basic research since it eliminates the need for time-consuming, cumbersome electrophoresis protocols and could be adjusted for use on the site of fish culture by fish farmers. Disease monitoring by such bioanalytical platforms without time consuming and costly procedures would have great impact on the aquaculture and environmental safety.
纸质纳米生物传感器已成为分析引发各种疾病的兽医和人类病原体的优良平台。特别是,侧向流动分析或生物传感器非常适合在实验室环境和现场分析中进行灵敏、快速、稳健且准确的分析。病毒RNA检测对于公共卫生以及动物健康保护都极为重要。在这方面,本方案着重于开发用于检测鱼类神经坏死病毒(诺达病毒)核酸的功能化金纳米颗粒侧向流动生物传感器。从鱼类样本中分离出的总病毒RNA进行逆转录PCR扩增,扩增产物与特异性寡核苷酸探针混合。当存在诺达病毒产物时会形成一条红色检测线。所提出的分析方法对基础研究具有重大意义,因为它无需耗时且繁琐的电泳方案,并且可以进行调整以便养鱼户在鱼类养殖现场使用。通过这种生物分析平台进行疾病监测,无需耗时且昂贵的程序,这将对水产养殖和环境安全产生重大影响。