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彩虹的完整叶绿体基因组序列及系统发育分析

Complete chloroplast genome sequence and phylogenetic analysis of Caihong.

作者信息

Zhuang Weibing, Shu Xiaochun, Zhang Hui, Wang Tao, Zhang Fengjiao, Wang Ning, Wang Zhong

机构信息

Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem. Sun Yat-Sen), Nanjing, PR China.

Forestry Scientific and Technical Extension Center, Lianshui, PR China.

出版信息

Mitochondrial DNA B Resour. 2021 Feb 8;6(2):389-390. doi: 10.1080/23802359.2020.1869612.

Abstract

Colored-leaf plants are increasingly popular, which has higher ecological, economic and social benefits. Caihong poplar, one of colored-leaf plants from , has been widely used in courtyard embellishment, road greening, garden set King and so on. In this study, the complete chloroplast genome of Caihong poplar was evaluated, and the total chloroplast genome size of which is 156,957 bp in length with 36.69% GC content, including large single-copy region (LSC) of 85,096 bp, a pair of inverted repeat regions (IRs) of 27,649 bp each, and a small single-copy region (SSC) of 16,563 bp. There were 22 genes, 83 protein-coding genes, and four genes. The phylogenetic analysis with 22 species indicated that Caihong poplar was closely clustered with Zhonglin 2025. In conclusion, the complete chloroplast genomes of Caihong poplar in this study provided valuable genomic resources for further phylogeny and species identification in the family.

摘要

彩叶植物越来越受欢迎,具有较高的生态、经济和社会效益。彩虹杨作为彩叶植物之一,已广泛应用于庭院美化、道路绿化、园林布景等。本研究对彩虹杨的叶绿体全基因组进行了评估,其叶绿体全基因组总长度为156,957bp,GC含量为36.69%,包括85,096bp的大单拷贝区(LSC)、两个各为27,649bp的反向重复区(IRs)和16,563bp的小单拷贝区(SSC)。有22个基因、83个蛋白质编码基因和4个基因。与22个物种的系统发育分析表明,彩虹杨与中林2025紧密聚类。总之,本研究中彩虹杨的叶绿体全基因组为杨柳科进一步的系统发育和物种鉴定提供了有价值的基因组资源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b43/7872566/526186e9fdbe/TMDN_A_1869612_F0001_B.jpg

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