Han Xue-Min, Wang Yi-Ming, Liu Yan-Jing
State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing, China.
University of Chinese Academy of Sciences, Beijing, China.
Mitochondrial DNA B Resour. 2017 Dec 8;2(2):932-933. doi: 10.1080/23802359.2017.1413291.
The complete chloroplast genome of was reconstructed by reference-based assembly using whole-genome sequencing data. The total chloroplast genome size of was 158,080 bp in length, including a pair of inverted repeat regions (IRs) of 27,749 bp each, a large single-copy region (LSC) of 85,949 bp and a small single-copy region (SSC) of 16,633 bp. A total of 133 genes were predicted from the chloroplast genome, including 86 protein-coding genes, 39 tRNA genes and eight rRNA genes. Among these genes, 20 genes occurred in IRs, containing nine protein-coding genes, seven tRNA genes and four rRNA genes. The GC content of chloroplast genome was 36.6%. The phylogenetic analysis with 15 other species showed that was closely clustered with . The complete chloroplast genome of provides new insights into evolutionary and genomic studies.
通过基于参考的组装，利用全基因组测序数据重建了[物种名称]的完整叶绿体基因组。[物种名称]的叶绿体基因组全长158,080 bp，包括一对长度均为27,749 bp的反向重复区域（IRs）、一个85,949 bp的大单拷贝区域（LSC）和一个16,633 bp的小单拷贝区域（SSC）。从叶绿体基因组中总共预测出133个基因，包括86个蛋白质编码基因、39个tRNA基因和8个rRNA基因。在这些基因中，有20个基因存在于IRs中，包括9个蛋白质编码基因、7个tRNA基因和4个rRNA基因。[物种名称]叶绿体基因组的GC含量为36.6%。与其他15个物种的系统发育分析表明，[物种名称]与[另一物种名称]紧密聚类。[物种名称]的完整叶绿体基因组为[物种名称]的进化和基因组研究提供了新的见解。
