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从加拿大艾伯塔省尾矿池水分离出的一个物种的全基因组序列

Complete Genome Sequence of a Species Isolated from Tailings Pond Water in Alberta, Canada.

作者信息

Shideler Steven, Headley John, Gauthier Jeff, Kukavica-Ibrulj Irena, Levesque Roger C, Lewenza Shawn

机构信息

Department of Microbiology, Immunology and Infectious Diseases, University of Calgary, Calgary, Alberta, Canada.

Environment and Climate Change Canada, National Hydrology Research Centre, Saskatoon, Saskatchewan, Canada.

出版信息

Microbiol Resour Announc. 2021 Mar 4;10(9):e01174-20. doi: 10.1128/MRA.01174-20.

Abstract

We report the complete genome sequence of strain OST1909, belonging to a species. The genome size is 6,306,352 bp, with a G+C content of 59.6%. The isolate was recovered from oil sands process-affected water (OSPW), despite the numerous toxic compounds that accumulate in oil sands tailings ponds.

摘要

我们报告了属于某一物种的OST1909菌株的完整基因组序列。基因组大小为6,306,352 bp,G+C含量为59.6%。该分离株是从油砂加工影响水(OSPW)中分离得到的,尽管油砂尾矿池中积累了大量有毒化合物。

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The toxicity of oil sands process-affected water (OSPW): A critical review.油砂开采影响下水(OSPW)的毒性:一项批判性回顾。
Sci Total Environ. 2017 Dec 1;601-602:1785-1802. doi: 10.1016/j.scitotenv.2017.06.024. Epub 2017 Jun 11.
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NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
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QUAST: quality assessment tool for genome assemblies.QUAST:基因组组装质量评估工具。
Bioinformatics. 2013 Apr 15;29(8):1072-5. doi: 10.1093/bioinformatics/btt086. Epub 2013 Feb 19.

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