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MLST 丛簇 2 中的艰难梭菌菌株的微生物特征、流行病学和临床特征:综述。

Microbiological features, epidemiology, and clinical presentation of Clostridioidesdifficile strains from MLST Clade 2: A narrative review.

机构信息

Centro de Investigación en Enfermedades Tropicales, Facultad de Microbiología, and Master's Program in Microbiology, Parasitology, Clinical Chemistry and Immunology, Universidad de Costa Rica, Costa Rica.

Centro de Investigación en Enfermedades Tropicales, Facultad de Microbiología, and Master's Program in Microbiology, Parasitology, Clinical Chemistry and Immunology, Universidad de Costa Rica, Costa Rica.

出版信息

Anaerobe. 2021 Jun;69:102355. doi: 10.1016/j.anaerobe.2021.102355. Epub 2021 Mar 10.

Abstract

Clostridioides difficile is an emerging One Health pathogen and a common etiologic agent of diarrhea, both in healthcare settings and the community. This bacterial species is highly diverse, and its global population has been classified in eight clades by multilocus sequence typing (MLST). The C. difficile MLST Clade 2 includes the NAP1/RT027/ST01 strain, which is highly recognized due to its epidemicity and association with severe disease presentation and mortality. By contrast, the remaining 83 sequence types (STs) that compose this clade have received much less attention. In response to this shortcoming, we reviewed articles published in English between 1999 and 2020 and collected information for 27 Clade 2 STs, with an emphasis on STs 01, 67, 41 and 188/231/365. Our analysis provides evidence of large phenotypic differences that preclude support of the rather widespread notion that ST01 and Clade 2 strains are "hypervirulent". Moreover, it revealed a profound lack of (meta)data for nearly 70% of the Clade 2 STs that have been identified in surveillance efforts. Targeted studies aiming to relate wet-lab and bioinformatics results to patient and clinical parameters should be performed to gain a more in-depth insight into the biology of this intriguing group of C. difficile isolates.

摘要

艰难梭菌是一种新兴的“同一健康”病原体,也是医疗机构和社区中腹泻的常见病因。该细菌种类具有高度多样性,其全球种群已通过多位点序列分型(MLST)分为 8 个分支。艰难梭菌 MLST 分支 2 包括 NAP1/RT027/ST01 菌株,由于其流行率以及与严重疾病表现和死亡率的关联,该菌株受到高度关注。相比之下,该分支中其余 83 个序列型(ST)得到的关注则要少得多。针对这一不足,我们对 1999 年至 2020 年期间发表的英文文章进行了综述,并收集了 27 个分支 2 ST 的信息,重点关注 ST01、67、41 和 188/231/365。我们的分析提供了大量表型差异的证据,这使得人们普遍认为 ST01 和分支 2 菌株是“超级毒力”的观点难以成立。此外,我们还发现,在监测工作中发现的近 70%的分支 2 ST 几乎缺乏(元)数据。应开展针对这些 ST 的靶向研究,将湿实验室和生物信息学结果与患者和临床参数联系起来,以更深入地了解这组有趣的艰难梭菌分离株的生物学特性。

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